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    tm2d2 TM2 domain containing 2 [ Danio rerio (zebrafish) ]

    Gene ID: 436913, updated on 9-Dec-2024

    Summary

    Official Symbol
    tm2d2provided by ZNC
    Official Full Name
    TM2 domain containing 2provided by ZNC
    Primary source
    ZFIN:ZDB-GENE-040718-387
    See related
    Ensembl:ENSDARG00000035515 AllianceGenome:ZFIN:ZDB-GENE-040718-387
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    zgc:92201
    Summary
    Predicted to be located in membrane. Orthologous to human TM2D2 (TM2 domain containing 2). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
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    Genomic context

    See tm2d2 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 5 NC_007116.7 (26921033..26926529)
    105 previous assembly GRCz10 (GCF_000002035.5) 5 NC_007116.6 (26320880..26326376)

    Chromosome 5 - NC_007116.7Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC137495515 Neighboring gene T-box transcription factor 3b Neighboring gene HtrA serine peptidase 4 Neighboring gene uncharacterized LOC101886271

    Genomic regions, transcripts, and products

    Expression

    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    General protein information

    Preferred Names
    TM2 domain-containing protein 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001002640.1NP_001002640.1  TM2 domain-containing protein 2 precursor

      See identical proteins and their annotated locations for NP_001002640.1

      Status: PROVISIONAL

      Source sequence(s)
      BC075934
      UniProtKB/Swiss-Prot
      Q6DHN3
      Related
      ENSDARP00000051482.5, ENSDART00000051483.5
      Conserved Domains (1) summary
      pfam05154
      Location:161210
      TM2; TM2 domain

    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007116.7 Reference GRCz11 Primary Assembly

      Range
      26921033..26926529
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)