gosr1 golgi SNAP receptor complex member 1 [Danio rerio (zebrafish)] - Gene

Summary

Official Symbol: gosr1provided by ZNC
Official Full Name: golgi SNAP receptor complex member 1provided by ZNC
Primary source: ZFIN:ZDB-GENE-050417-133
See related: Ensembl:ENSDARG00000026654 AllianceGenome:ZFIN:ZDB-GENE-050417-133
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as: zgc:112064
Summary: Predicted to enable SNAP receptor activity. Predicted to be involved in endoplasmic reticulum to Golgi vesicle-mediated transport; inter-Golgi cisterna vesicle-mediated transport; and vesicle fusion. Predicted to act upstream of or within protein transport and vesicle-mediated transport. Predicted to be located in cis-Golgi network and membrane. Predicted to be part of SNARE complex. Predicted to be active in Golgi medial cisterna and Golgi membrane. Orthologous to human GOSR1 (golgi SNAP receptor complex member 1). [provided by Alliance of Genome Resources, Dec 2024]
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 15

Exon count:: 9

Annotation release	Status	Assembly	Chr	Location
RS_2024_08	current	GRCz11 (GCF_000002035.6)	15	NC_007126.7 (24795489..24837772)
105	previous assembly	GRCz10 (GCF_000002035.5)	15	NC_007126.6 (24860209..24902405)

Chromosome 15 - NC_007126.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Expression

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See details

Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
BioProject: PRJEB1986
Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by ZFIN

Function	Evidence Code	Pubs
enables SNAP receptor activity	IBA Inferred from Biological aspect of Ancestor more info

Process	Evidence Code	Pubs
involved_in endoplasmic reticulum to Golgi vesicle-mediated transport	IBA Inferred from Biological aspect of Ancestor more info
acts_upstream_of_or_within endoplasmic reticulum to Golgi vesicle-mediated transport	IEA Inferred from Electronic Annotation more info
involved_in inter-Golgi cisterna vesicle-mediated transport	IBA Inferred from Biological aspect of Ancestor more info
acts_upstream_of_or_within protein transport	IEA Inferred from Electronic Annotation more info
involved_in vesicle fusion	IBA Inferred from Biological aspect of Ancestor more info
acts_upstream_of_or_within vesicle-mediated transport	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
located_in Golgi apparatus	IEA Inferred from Electronic Annotation more info
is_active_in Golgi medial cisterna	IBA Inferred from Biological aspect of Ancestor more info
is_active_in Golgi membrane	IBA Inferred from Biological aspect of Ancestor more info
located_in Golgi membrane	IEA Inferred from Electronic Annotation more info
part_of SNARE complex	IBA Inferred from Biological aspect of Ancestor more info
located_in cis-Golgi network	IEA Inferred from Electronic Annotation more info
located_in membrane	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: Golgi SNAP receptor complex member 1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001017651.2 → NP_001017651.1 Golgi SNAP receptor complex member 1

See identical proteins and their annotated locations for NP_001017651.1

Status: PROVISIONAL

Source sequence(s)

BC093179

UniProtKB/TrEMBL

Q567G7

Related

ENSDARP00000091519.3, ENSDART00000100746.5

Conserved Domains (1) summary

cd15864
Location:151 → 216

SNARE_GS28; SNARE motif of GS28

RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

NC_007126.7 Reference GRCz11 Primary Assembly

Range

24795489..24837772

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_005157565.5 → XP_005157622.1 Golgi SNAP receptor complex member 1 isoform X1

UniProtKB/TrEMBL

A0A8M2B4E0, E9QFW9

Related

ENSDARP00000118226.1, ENSDART00000139689.3

Conserved Domains (1) summary

cd15864
Location:158 → 223

SNARE_GS28; SNARE motif of GS28
XM_005157566.5 → XP_005157623.1 Golgi SNAP receptor complex member 1 isoform X2

UniProtKB/TrEMBL

A0A8M2B3P9, E9QH18

Related

ENSDARP00000115244.1, ENSDART00000141033.3

Conserved Domains (1) summary

cd15864
Location:157 → 222

SNARE_GS28; SNARE motif of GS28