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    gig2d grass carp reovirus (GCRV)-induced gene 2d [ Danio rerio (zebrafish) ]

    Gene ID: 100005232, updated on 9-Dec-2024

    Summary

    Official Symbol
    gig2dprovided by ZNC
    Official Full Name
    grass carp reovirus (GCRV)-induced gene 2dprovided by ZNC
    Primary source
    ZFIN:ZDB-GENE-130517-1
    See related
    Ensembl:ENSDARG00000098772 AllianceGenome:ZFIN:ZDB-GENE-130517-1
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Summary
    Predicted to enable NAD+-protein poly-ADP-ribosyltransferase activity. Predicted to be active in cytoplasm. Is expressed in several structures, including eye; gill; heart; liver; and pleuroperitoneal region. [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
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    Genomic context

    See gig2d in Genome Data Viewer
    Location:
    chromosome: 21
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 21 NC_007132.7 (22692633..22693730, complement)
    105 previous assembly GRCz10 (GCF_000002035.5) 21 NC_007132.6 (22656028..22657125, complement)

    Chromosome 21 - NC_007132.7Genomic Context describing neighboring genes Neighboring gene grass carp reovirus (GCRV)-induced gene 2f Neighboring gene grass carp reovirus (GCRV)-induced gene 2e Neighboring gene BUD13 homolog Neighboring gene si:dkeyp-69c1.9

    Genomic regions, transcripts, and products

    Expression

    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    General protein information

    Preferred Names
    grass carp reovirus (GCRV)-induced gene 2d
    Names
    DreD
    Gig2-like protein DreD

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001245987.1NP_001232916.1  grass carp reovirus (GCRV)-induced gene 2d

      See identical proteins and their annotated locations for NP_001232916.1

      Status: PROVISIONAL

      Source sequence(s)
      HQ269371
      UniProtKB/TrEMBL
      A0A8M1NYU2, F2WZ28
      Related
      ENSDARP00000138210.1, ENSDART00000158342.2
      Conserved Domains (1) summary
      cl00283
      Location:2778
      ADP_ribosyl; ADP_ribosylating enzymes catalyze the transfer of ADP_ribose from NAD+ to substrates. Bacterial toxins are cytoplasmic and catalyze the transfer of a single ADP_ribose unit to eukaryotic elongation factor 2, halting protein synthesis and killing the cell. ...

    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007132.7 Reference GRCz11 Primary Assembly

      Range
      22692633..22693730 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Reference GRCz11 ALT_DRER_TU_1

    Genomic

    1. NW_018395091.1 Reference GRCz11 ALT_DRER_TU_1

      Range
      115349..116446 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)