rasl11a RAS-like, family 11, member A [Danio rerio (zebrafish)] - Gene

Summary

Official Symbol: rasl11aprovided by ZNC
Official Full Name: RAS-like, family 11, member Aprovided by ZNC
Primary source: ZFIN:ZDB-GENE-050417-384
See related: Ensembl:ENSDARG00000046013 AllianceGenome:ZFIN:ZDB-GENE-050417-384
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as: zgc:110179
Summary: Predicted to enable G protein activity and GTP binding activity. Predicted to be involved in positive regulation of transcription by RNA polymerase I. Predicted to be located in nucleolus. Is expressed in several structures, including anterior axial hypoblast; head mesenchyme; musculature system; polster; and spinal cord. Orthologous to human RASL11A (RAS like family 11 member A). [provided by Alliance of Genome Resources, Dec 2024]
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 7

Exon count:: 4

Annotation release	Status	Assembly	Chr	Location
RS_2024_08	current	GRCz11 (GCF_000002035.6)	7	NC_007118.7 (51315634..51320765, complement)
105	previous assembly	GRCz10 (GCF_000002035.5)	7	NC_007118.6 (51039664..51046099, complement)

Chromosome 7 - NC_007118.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Expression

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See details

Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
BioProject: PRJEB1986
Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by ZFIN

Function	Evidence Code	Pubs
enables G protein activity	IEA Inferred from Electronic Annotation more info
enables GTP binding	IEA Inferred from Electronic Annotation more info
enables GTPase activity	IEA Inferred from Electronic Annotation more info
enables hydrolase activity	IEA Inferred from Electronic Annotation more info
enables nucleotide binding	IEA Inferred from Electronic Annotation more info

Process	Evidence Code	Pubs
involved_in positive regulation of transcription by RNA polymerase I	ISS Inferred from Sequence or Structural Similarity more info

Component	Evidence Code	Pubs
located_in nucleolus	ISS Inferred from Sequence or Structural Similarity more info
located_in nucleus	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: ras-like protein family member 11A-like

NP_001017840.2

EC 3.6.5.2

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001017840.2 → NP_001017840.2 ras-like protein family member 11A-like

See identical proteins and their annotated locations for NP_001017840.2

Status: PROVISIONAL

Source sequence(s)

EF088669

UniProtKB/Swiss-Prot

A1DZY4

Related

ENSDARP00000067646.6, ENSDART00000067647.9

Conserved Domains (2) summary

cd04146
Location:38 → 208

RERG_RasL11_like; Ras-related and Estrogen-Regulated Growth inhibitor (RERG) and Ras-like 11 (RasL11)-like families

pfam00071
Location:38 → 206

Ras; Ras family