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    Psx1 placenta specific homeobox 1 [ Rattus norvegicus (Norway rat) ]

    Gene ID: 296535, updated on 2-Nov-2024

    Summary

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    Official Symbol
    Psx1provided by RGD
    Official Full Name
    placenta specific homeobox 1provided by RGD
    Primary source
    RGD:1311402
    See related
    AllianceGenome:RGD:1311402
    Gene type
    pseudo
    RefSeq status
    INFERRED
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Summary
    Predicted to enable DNA-binding transcription activator activity, RNA polymerase II-specific. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to be active in nucleus. [provided by Alliance of Genome Resources, Nov 2024]
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    Genomic context

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    See Psx1 in Genome Data Viewer
    Location:
    3p13
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 3 NC_086021.1 (26655193..26656038, complement)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 3 NC_051338.1 (6251362..6252207, complement)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 3 NC_005102.4 (573921..574592, complement)

    Chromosome 3 - NC_086021.1Genomic Context describing neighboring genes Neighboring gene heat shock protein family A (Hsp70) member 8, pseudogene 21 Neighboring gene ecdysoneless cell cycle regulator, pseudogene 1 Neighboring gene Glyceraldehyde-3-phosphate dehydrogenase, pseudogene 99 Neighboring gene uncharacterized LOC134486056 Neighboring gene histamine N-methyltransferase

    Genomic regions, transcripts, and products

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    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Other Names

    • homeobox protein Rhox5

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    Genomic

    1. NG_081297.1 

      Range
      101..946
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      GenBank, FASTA, Sequence Viewer (Graphics)

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086021.1 Reference GRCr8

      Range
      26655193..26656038 complement
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      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein Strain
    Heading Accession and Version

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