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    Taar7c trace amine-associated receptor 7C [ Rattus norvegicus (Norway rat) ]

    Gene ID: 494535, updated on 4-Jan-2025

    Summary

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    Official Symbol
    Taar7cprovided by RGD
    Official Full Name
    trace amine-associated receptor 7Cprovided by RGD
    Primary source
    RGD:1359258
    See related
    EnsemblRapid:ENSRNOG00000091206 AllianceGenome:RGD:1359258
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Summary
    Predicted to enable trace-amine receptor activity. Predicted to be involved in G protein-coupled receptor signaling pathway. Predicted to be active in plasma membrane. [provided by Alliance of Genome Resources, Jan 2025]
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    Genomic context

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    See Taar7c in Genome Data Viewer
    Location:
    1p12
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 1 NC_086019.1 (23248612..23249688, complement)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 1 NC_051336.1 (21429364..21430440, complement)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 1 NC_005100.4 (22507094..22508170, complement)

    Chromosome 1 - NC_086019.1Genomic Context describing neighboring genes Neighboring gene trace-amine-associated receptor 7e Neighboring gene trace-amine-associated receptor 7d Neighboring gene trace amine-associated receptor 7b Neighboring gene trace amine-associated receptor 7a

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Expression of trace amine-associated receptors in the Grueneberg ganglion. Fleischer J, et al. Chem Senses, 2007 Jul. PMID 17556730
    2. Trace amines: identification of a family of mammalian G protein-coupled receptors. Borowsky B, et al. Proc Natl Acad Sci U S A, 2001 Jul 31. PMID 11459929, Free PMC Article
    3. Trace amine-associated receptors form structurally and functionally distinct subfamilies of novel G protein-coupled receptors. Lindemann L, et al. Genomics, 2005 Mar. PMID 15718104
    4. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RGD

    Function Evidence Code Pubs
    enables trace-amine receptor activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Process Evidence Code Pubs
    involved_in G protein-coupled receptor signaling pathway IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Component Evidence Code Pubs
    is_active_in plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    trace amine-associated receptor 7c
    Names
    taR-7c
    trace amine associated receptor 7c
    trace amine receptor 7c

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001009975.1 → NP_001009975.1  trace amine-associated receptor 7c

      See identical proteins and their annotated locations for NP_001009975.1

      Status: PROVISIONAL

      Source sequence(s)
      AY702320
      UniProtKB/Swiss-Prot
      Q5QD21, Q923X6
      UniProtKB/TrEMBL
      A6JUM4
      Related
      ENSRNOP00000041914.2, ENSRNOT00000050763.4
      Conserved Domains (2) summary
      pfam00001
      Location:64 → 326
      7tm_1; 7 transmembrane receptor (rhodopsin family)
      cl21561
      Location:54 → 184
      7tm_4; Olfactory receptor

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086019.1 Reference GRCr8

      Range
      23248612..23249688 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein Strain
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q5QD21.1 GenPept UniProtKB/Swiss-Prot:Q5QD21

    Gene LinkOut

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