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    Tex29 testis expressed 29 [ Rattus norvegicus (Norway rat) ]

    Gene ID: 498664, updated on 27-Nov-2024

    Summary

    Official Symbol
    Tex29provided by RGD
    Official Full Name
    testis expressed 29provided by RGD
    Primary source
    RGD:1565377
    See related
    EnsemblRapid:ENSRNOG00000033585 AllianceGenome:RGD:1565377
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Summary
    Predicted to be located in membrane. Orthologous to human TEX29 (testis expressed 29). [provided by Alliance of Genome Resources, Nov 2024]
    Expression
    Biased expression in Testes (RPKM 7.0), Spleen (RPKM 3.3) and 9 other tissues See more
    Orthologs
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    Genomic context

    See Tex29 in Genome Data Viewer
    Location:
    16q12.5
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 16 NC_086034.1 (84352574..84366273, complement)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 16 NC_051351.1 (77650471..77664171, complement)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 16 NC_005115.4 (82985834..83000928, complement)

    Chromosome 16 - NC_086034.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC120097565 Neighboring gene uncharacterized LOC102553495 Neighboring gene SRY-box transcription factor 1 Neighboring gene uncharacterized LOC134482535 Neighboring gene Rho guanine nucleotide exchange factor 7 Neighboring gene uncharacterized LOC134482534

    Genomic regions, transcripts, and products

    Expression

    • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
    • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
    • BioProject: PRJNA238328
    • Publication: PMID 24510058
    • Analysis date: Mon Jun 6 17:44:12 2016

    General protein information

    Preferred Names
    testis-expressed protein 29
    Names
    testis-expressed sequence 29 protein
    uncharacterized protein C13orf16 homolog

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001017508.3NP_001017508.1  testis-expressed protein 29

      See identical proteins and their annotated locations for NP_001017508.1

      Status: VALIDATED

      Source sequence(s)
      JAXUCZ010000016
      UniProtKB/Swiss-Prot
      Q6AXY3
      Conserved Domains (1) summary
      pfam15839
      Location:2088
      TEX29; Testis-expressed sequence 29 protein
    2. NM_001415041.1NP_001401970.1  testis-expressed protein 29

      Status: VALIDATED

      Source sequence(s)
      JAXUCZ010000016
      UniProtKB/Swiss-Prot
      Q6AXY3
      Related
      ENSRNOP00000042289.2, ENSRNOT00000041223.4

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086034.1 Reference GRCr8

      Range
      84352574..84366273 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)