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    str-44 Seven TM Receptor [ Caenorhabditis elegans ]

    Gene ID: 191978, updated on 9-Dec-2024

    Summary

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    Official Symbol
    str-44
    Official Full Name
    Seven TM Receptor
    Primary source
    WormBase:WBGene00006109
    Locus tag
    CELE_C42D4.4
    See related
    AllianceGenome:WB:WBGene00006109
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Located in non-motile cilium. Is expressed in AWAL; AWAR; AWBL; AWBR; and in male. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See str-44 in Genome Data Viewer
    Location:
    chromosome: IV
    Exon count:
    4
    Sequence:
    Chromosome: IV; NC_003282.8 (7177187..7178423)

    Chromosome IV - NC_003282.8Genomic Context describing neighboring genes Neighboring gene Seven TM Receptor Neighboring gene Uncharacterized protein Neighboring gene protein of unknown function DB domain-containing protein Neighboring gene Carboxylesterase type B domain-containing protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003282.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Pathogenic bacteria modulate pheromone response to promote mating. Wu T, et al. Nature, 2023 Jan. PMID 36599989, Free PMC Article
    2. Diverse states and stimuli tune olfactory receptor expression levels to modulate food-seeking behavior. McLachlan IG, et al. Elife, 2022 Aug 31. PMID 36044259, Free PMC Article
    3. Updating the str and srj (stl) families of chemoreceptors in Caenorhabditis nematodes reveals frequent gene movement within and between chromosomes. Robertson HM. Chem Senses, 2001 Feb. PMID 11238245
    4. Diverse cell type-specific mechanisms localize G protein-coupled receptors to Caenorhabditis elegans sensory cilia. Brear AG, et al. Genetics, 2014 Jun. PMID 24646679, Free PMC Article
    5. Analysis of xbx genes in C. elegans. Efimenko E, et al. Development, 2005 Apr. PMID 15790967

    See all (6) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in non-motile cilium IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    Seven TM Receptor
    NP_501131.1
    • Partially confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003282.8 Reference assembly

      Range
      7177187..7178423
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_068730.1 → NP_501131.1  Seven TM Receptor [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_501131.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q18571
      Conserved Domains (1) summary
      pfam10326
      Location:8 → 314
      7TM_GPCR_Str; Serpentine type 7TM GPCR chemoreceptor Str
    Nucleotide Protein
    Heading Accession and Version

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