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    ztf-27 C2H2-type domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 188340, updated on 9-Dec-2024

    Summary

    Official Symbol
    ztf-27
    Official Full Name
    C2H2-type domain-containing protein
    Primary source
    WormBase:WBGene00011661
    Locus tag
    CELE_T09F3.1
    See related
    AllianceGenome:WB:WBGene00011661
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to enable DNA-binding transcription repressor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to be active in nucleoplasm. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

    See ztf-27 in Genome Data Viewer
    Location:
    chromosome: II
    Exon count:
    6
    Sequence:
    Chromosome: II; NC_003280.10 (10385333..10388133)

    Chromosome II - NC_003280.10Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene Uncharacterized protein Neighboring gene Uncharacterized protein

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General protein information

    Preferred Names
    C2H2-type domain-containing protein
    NP_496235.2
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003280.10 Reference assembly

      Range
      10385333..10388133
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_063834.5NP_496235.2  C2H2-type domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_496235.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      G5EDA0
      Conserved Domains (3) summary
      COG4049
      Location:246290
      COG4049; Uncharacterized protein, contains archaeal-type C2H2 Zn-finger [General function prediction only]
      sd00017
      Location:211238
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam13465
      Location:230255
      zf-H2C2_2; Zinc-finger double domain