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    R10E11.6 Uncharacterized protein [ Caenorhabditis elegans ]

    Gene ID: 3565637, updated on 9-Dec-2024

    Summary

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    Official Symbol
    R10E11.6
    Official Full Name
    Uncharacterized protein
    Primary source
    WormBase:WBGene00011218
    Locus tag
    CELE_R10E11.6
    See related
    AllianceGenome:WB:WBGene00011218
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Orthologous to human SYNRG (synergin gamma). [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See R10E11.6 in Genome Data Viewer
    Location:
    chromosome: III
    Exon count:
    5
    Sequence:
    Chromosome: III; NC_003281.10 (9783325..9786045)

    Chromosome III - NC_003281.10Genomic Context describing neighboring genes Neighboring gene V-type proton ATPase 16 kDa proteolipid subunit c 1 Neighboring gene V-type proton ATPase 16 kDa proteolipid subunit c 3 Neighboring gene Apolipoprotein A1/A4/E domain protein Neighboring gene Uncharacterized protein Neighboring gene ncRNA Neighboring gene DNA replication licensing factor mcm-6 Neighboring gene Serpentine receptor class XA 10

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003281.10

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Interactome analysis of Caenorhabditis elegans synapses by TurboID-based proximity labeling. Artan M, et al. J Biol Chem, 2021 Sep. PMID 34416233, Free PMC Article
    2. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    General protein information

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    Preferred Names
    Uncharacterized protein
    NP_001040862.1
    • Confirmed by transcript evidence
    NP_001040863.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003281.10 Reference assembly

      Range
      9783325..9786045
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001047397.6 → NP_001040862.1  Uncharacterized protein CELE_R10E11.6 [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001040862.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      P34550, Q2EEP4, Q2EEP5
      Conserved Domains (1) summary
      cd00052
      Location:72 → 118
      EH; Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and signal transduction. The alignment contains a pair of EF-hand motifs, typically one of them is canonical and binds to Ca2+, while the other may not bind to Ca2+. A ...

    2. NM_001047398.6 → NP_001040863.1  Uncharacterized protein CELE_R10E11.6 [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001040863.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      P34550
      Conserved Domains (1) summary
      cd00052
      Location:72 → 118
      EH; Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and signal transduction. The alignment contains a pair of EF-hand motifs, typically one of them is canonical and binds to Ca2+, while the other may not bind to Ca2+. A ...
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    P34550.2

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