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    elof-1 Transcription elongation factor 1 homolog [ Caenorhabditis elegans ]

    Gene ID: 175090, updated on 9-Dec-2024

    Summary

    Official Symbol
    elof-1
    Official Full Name
    Transcription elongation factor 1 homolog
    Primary source
    WormBase:WBGene00013219
    Locus tag
    CELE_Y54G11A.11
    See related
    AllianceGenome:WB:WBGene00013219
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to enable RNA polymerase II complex binding activity. Predicted to be involved in transcription elongation by RNA polymerase II. Located in nucleolus. Orthologous to human ELOF1 (elongation factor 1). [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

    See elof-1 in Genome Data Viewer
    Location:
    chromosome: II
    Exon count:
    2
    Sequence:
    Chromosome: II; NC_003280.10 (14350153..14350798)

    Chromosome II - NC_003280.10Genomic Context describing neighboring genes Neighboring gene FeS cluster biogenesis domain-containing protein Neighboring gene Protein lin-7 homolog Neighboring gene L51_S25_CI-B8 domain-containing protein Neighboring gene Glycogen debranching enzyme Neighboring gene pre-mRNA 3' end processing protein pfs-2 Neighboring gene SPK domain-containing protein

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables RNA polymerase II complex binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
     
    involved_in transcription elongation by RNA polymerase II IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Component Evidence Code Pubs
    located_in nucleolus HDA PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
     
    part_of transcription elongation factor complex IBA
    Inferred from Biological aspect of Ancestor
    more info
     

    General protein information

    Preferred Names
    Transcription elongation factor 1 homolog
    NP_496983.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003280.10 Reference assembly

      Range
      14350153..14350798
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_064582.10NP_496983.1  Transcription elongation factor 1 homolog [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_496983.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9XVZ8
      Conserved Domains (1) summary
      pfam05129
      Location:679
      Elf1; Transcription elongation factor Elf1 like