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    K07A1.10 Large ribosomal subunit protein mL64 [ Caenorhabditis elegans ]

    Gene ID: 187083, updated on 9-Dec-2024

    Summary

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    Official Symbol
    K07A1.10
    Official Full Name
    Large ribosomal subunit protein mL64
    Primary source
    WormBase:WBGene00010616
    Locus tag
    CELE_K07A1.10
    See related
    AllianceGenome:WB:WBGene00010616
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to be located in nucleus and ribosome. Predicted to be part of ribonucleoprotein complex. Predicted to be active in mitochondrion. Orthologous to human GADD45GIP1 (GADD45G interacting protein 1). [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See K07A1.10 in Genome Data Viewer
    Location:
    chromosome: I
    Exon count:
    3
    Sequence:
    Chromosome: I; NC_003279.8 (9615192..9616333, complement)

    Chromosome I - NC_003279.8Genomic Context describing neighboring genes Neighboring gene Sm domain-containing protein Neighboring gene L-type lectin-like domain-containing protein Neighboring gene ATE_N domain-containing protein;Arginyl-tRNA--protein transferase 1 Neighboring gene putative histone-binding protein rba-1 Neighboring gene putative histone-binding protein lin-53

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003279.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Novel LOTUS-domain proteins are organizational hubs that recruit C. elegans Vasa to germ granules. Cipriani PG, et al. Elife, 2021 Jul 5. PMID 34223818, Free PMC Article
    2. EPIC: software toolkit for elution profile-based inference of protein complexes. Hu LZ, et al. Nat Methods, 2019 Aug. PMID 31308550, Free PMC Article
    3. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Process Evidence Code Pubs
    involved_in cell cycle IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    is_active_in mitochondrion IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    located_in mitochondrion IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		  
    part_of ribonucleoprotein complex IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in ribosome IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    Large ribosomal subunit protein mL64
    NP_492550.3
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003279.8 Reference assembly

      Range
      9615192..9616333 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_060149.6 → NP_492550.3  Large ribosomal subunit protein mL64 [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_492550.3

      Status: REVIEWED

      UniProtKB/TrEMBL
      P90915
      Conserved Domains (1) summary
      pfam10147
      Location:8 → 203
      CR6_interact; Growth arrest and DNA-damage-inducible proteins-interacting protein 1
    Nucleotide Protein
    Heading Accession and Version

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