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    srj-38 Serpentine receptor class J-38 [ Caenorhabditis elegans ]

    Gene ID: 191945, updated on 9-Dec-2024

    Summary

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    Official Symbol
    srj-38
    Official Full Name
    Serpentine receptor class J-38
    Primary source
    WormBase:WBGene00005622
    Locus tag
    CELE_T02B11.5
    See related
    AllianceGenome:WB:WBGene00005622
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to be located in membrane. Is expressed in neurons; pharynx; somatic nervous system; and in male. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See srj-38 in Genome Data Viewer
    Location:
    chromosome: V
    Exon count:
    5
    Sequence:
    Chromosome: V; NC_003283.11 (882176..884424, complement)

    Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene Granulins domain-containing protein Neighboring gene Serpentine receptor class gamma-53 Neighboring gene Major facilitator superfamily (MFS) profile domain-containing protein Neighboring gene SXP/RAL-2 family protein Ani s 5-like cation-binding domain-containing protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003283.11

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A nematode model to evaluate microdeletion phenotype expression. Antkowiak KR, et al. G3 (Bethesda), 2024 Feb 7. PMID 37956108, Free PMC Article
    2. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Gene Ontology Provided by WormBase

    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    Serpentine receptor class J-38
    NP_503349.1
    • Predicted

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003283.11 Reference assembly

      Range
      882176..884424 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_070948.1 → NP_503349.1  Serpentine receptor class J-38 [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_503349.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      O16975
      Conserved Domains (1) summary
      pfam10319
      Location:1 → 309
      7TM_GPCR_Srj; Serpentine type 7TM GPCR chemoreceptor Srj
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    O16975.2

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