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    pqn-80 HUN domain-containing protein;Hpc2-related domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 176683, updated on 18-Sep-2024

    Summary

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    Official Symbol
    pqn-80
    Official Full Name
    HUN domain-containing protein;Hpc2-related domain-containing protein
    Primary source
    WormBase:WBGene00004161
    Locus tag
    CELE_Y111B2A.14
    See related
    AllianceGenome:WB:WBGene00004161
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
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    Genomic context

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    See pqn-80 in Genome Data Viewer
    Location:
    chromosome: III
    Exon count:
    22
    Sequence:
    Chromosome: III; NC_003281.10 (12626568..12651761)

    Chromosome III - NC_003281.10Genomic Context describing neighboring genes Neighboring gene WD_REPEATS_REGION domain-containing protein Neighboring gene Transcription initiation factor IIA subunit 2 Neighboring gene ncRNA Neighboring gene Protein-tyrosine sulfotransferase A Neighboring gene TAFII55 protein conserved region domain-containing protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003281.10

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. H3.3 Nucleosome Assembly Mutants Display a Late-Onset Maternal Effect. Burkhart KB, et al. Curr Biol, 2020 Jun 22. PMID 32470364, Free PMC Article
    2. Spatial single-cell sequencing of meiosis I arrested oocytes indicates acquisition of maternal transcripts from the soma. Trimmer KA, et al. Cell Rep, 2023 Jun 27. PMID 37227820, Free PMC Article
    3. Novel LOTUS-domain proteins are organizational hubs that recruit C. elegans Vasa to germ granules. Cipriani PG, et al. Elife, 2021 Jul 5. PMID 34223818, Free PMC Article
    4. OrthoList 2: A New Comparative Genomic Analysis of Human and Caenorhabditis elegans Genes. Kim W, et al. Genetics, 2018 Oct. PMID 30120140, Free PMC Article
    5. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    General protein information

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    Preferred Names
    HUN domain-containing protein;Hpc2-related domain-containing protein
    NP_001255177.1
    • Confirmed by transcript evidence
    NP_001255178.1
    • Confirmed by transcript evidence
    NP_001299887.1
    • Confirmed by transcript evidence
    NP_001299888.1
    • Confirmed by transcript evidence
    NP_001299889.1
    • Confirmed by transcript evidence
    NP_001299890.1
    • Confirmed by transcript evidence
    NP_001299891.1
    • Confirmed by transcript evidence
    NP_001299892.1
    • Confirmed by transcript evidence
    NP_001299893.1
    • Confirmed by transcript evidence
    NP_001299894.1
    • Confirmed by transcript evidence
    NP_001299895.1
    • Confirmed by transcript evidence
    NP_001299896.1
    • Confirmed by transcript evidence
    NP_001299897.1
    • Confirmed by transcript evidence
    NP_001299898.1
    • Confirmed by transcript evidence
    NP_001299899.1
    • Confirmed by transcript evidence
    NP_001360800.1
    • Confirmed by transcript evidence
    NP_001368536.1
    • Confirmed by transcript evidence
    NP_001368537.1
    • Confirmed by transcript evidence
    NP_001382699.1
    • Partially confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003281.10 Reference assembly

      Range
      12626568..12651761
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001268249.2 → NP_001255178.1  Hpc2-related domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001255178.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      C7IVS5
      Conserved Domains (1) summary
      PTZ00121
      Location:886 → 1075
      PTZ00121; MAEBL; Provisional

    2. NM_001312958.3 → NP_001299887.1  Hpc2-related domain-containing protein [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A0K3AX73
      Conserved Domains (2) summary
      PTZ00121
      Location:891 → 1072
      PTZ00121; MAEBL; Provisional
      COG4372
      Location:969 → 1207
      COG4372; Uncharacterized conserved protein, contains DUF3084 domain [Function unknown]

    3. NM_001372667.1 → NP_001360800.1  Hpc2-related domain-containing protein [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A565CXH6

    4. NM_001268248.4 → NP_001255177.1  Hpc2-related domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001255177.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      C7IVS6
      Conserved Domains (2) summary
      PTZ00121
      Location:888 → 1069
      PTZ00121; MAEBL; Provisional
      COG4372
      Location:966 → 1204
      COG4372; Uncharacterized conserved protein, contains DUF3084 domain [Function unknown]

    5. NM_001312959.3 → NP_001299888.1  Hpc2-related domain-containing protein [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A0K3ARW1
      Conserved Domains (1) summary
      PTZ00121
      Location:889 → 1078
      PTZ00121; MAEBL; Provisional

    6. NM_001395775.1 → NP_001382699.1  Hpc2-related domain-containing protein [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A7R9XND6

    7. NM_001312960.3 → NP_001299889.1  HUN domain-containing protein [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A0K3AU63
      Conserved Domains (1) summary
      PTZ00121
      Location:698 → 931
      PTZ00121; MAEBL; Provisional

    8. NM_001312961.3 → NP_001299890.1  HUN domain-containing protein [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A0K3ARB4
      Conserved Domains (1) summary
      PTZ00121
      Location:696 → 885
      PTZ00121; MAEBL; Provisional

    9. NM_001312962.3 → NP_001299891.1  HUN domain-containing protein [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A0K3AUW7
      Conserved Domains (1) summary
      PTZ00121
      Location:695 → 928
      PTZ00121; MAEBL; Provisional

    10. NM_001312963.3 → NP_001299892.1  HUN domain-containing protein [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A0K3AX79
      Conserved Domains (1) summary
      PTZ00121
      Location:693 → 882
      PTZ00121; MAEBL; Provisional

    11. NM_001312964.3 → NP_001299893.1  HUN domain-containing protein [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A0K3ARW5
      Conserved Domains (2) summary
      PTZ00121
      Location:508 → 689
      PTZ00121; MAEBL; Provisional
      COG4372
      Location:586 → 824
      COG4372; Uncharacterized conserved protein, contains DUF3084 domain [Function unknown]

    12. NM_001312965.3 → NP_001299894.1  HUN domain-containing protein [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A0K3AU69
      Conserved Domains (1) summary
      PTZ00121
      Location:506 → 695
      PTZ00121; MAEBL; Provisional

    13. NM_001312966.3 → NP_001299895.1  HUN domain-containing protein [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A0K3ARB9
      Conserved Domains (2) summary
      PTZ00121
      Location:505 → 686
      PTZ00121; MAEBL; Provisional
      COG4372
      Location:583 → 821
      COG4372; Uncharacterized conserved protein, contains DUF3084 domain [Function unknown]

    14. NM_001312967.3 → NP_001299896.1  HUN domain-containing protein [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A0K3AUX0
      Conserved Domains (1) summary
      PTZ00121
      Location:503 → 692
      PTZ00121; MAEBL; Provisional

    15. NM_001312968.3 → NP_001299897.1  HUN domain-containing protein [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A0K3AX82
      Conserved Domains (1) summary
      PTZ00121
      Location:32 → 265
      PTZ00121; MAEBL; Provisional

    16. NM_001312969.3 → NP_001299898.1  HUN domain-containing protein [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A0K3ARX0
      Conserved Domains (1) summary
      PTZ00121
      Location:30 → 219
      PTZ00121; MAEBL; Provisional

    17. NM_001312970.3 → NP_001299899.1  HUN domain-containing protein [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A0K3AU76

    18. NM_001379963.1 → NP_001368536.1  HUN domain-containing protein [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A0K3ARC4

    19. NM_001379964.1 → NP_001368537.1  HUN domain-containing protein [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A0K3AUX4
    Nucleotide Protein
    Heading Accession and Version

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