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    ttr-35 Transthyretin-like family protein [ Caenorhabditis elegans ]

    Gene ID: 180925, updated on 9-Dec-2024

    Summary

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    Official Symbol
    ttr-35
    Official Full Name
    Transthyretin-like family protein
    Primary source
    WormBase:WBGene00017688
    Locus tag
    CELE_F22A3.2
    See related
    AllianceGenome:WB:WBGene00017688
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to be located in cell surface and extracellular region. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See ttr-35 in Genome Data Viewer
    Location:
    chromosome: X
    Exon count:
    3
    Sequence:
    Chromosome: X; NC_003284.9 (6512285..6512918)

    Chromosome X - NC_003284.9Genomic Context describing neighboring genes Neighboring gene Ionotropic glutamate receptor L-glutamate and glycine-binding domain-containing protein Neighboring gene ncRNA Neighboring gene Transthyretin-like family protein Neighboring gene ncRNA Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003284.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. An integrated strategy to study muscle development and myofilament structure in Caenorhabditis elegans. Meissner B, et al. PLoS Genet, 2009 Jun. PMID 19557190, Free PMC Article
    2. EPIC: software toolkit for elution profile-based inference of protein complexes. Hu LZ, et al. Nat Methods, 2019 Aug. PMID 31308550, Free PMC Article
    3. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Component Evidence Code Pubs
    located_in cell surface IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in extracellular region IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    Transthyretin-like family protein
    NP_509098.2
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003284.9 Reference assembly

      Range
      6512285..6512918
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_076697.7 → NP_509098.2  Transthyretin-like family protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_509098.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q19694
      Conserved Domains (1) summary
      pfam01060
      Location:32 → 111
      TTR-52; Transthyretin-like family
    Nucleotide Protein
    Heading Accession and Version

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