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    C30G4.4 TSC22 domain family protein 1;TSC22 domain family protein 1-like;TSC22 domain family protein 3 [ Caenorhabditis elegans ]

    Gene ID: 181746, updated on 9-Dec-2024

    Summary

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    Official Symbol
    C30G4.4
    Official Full Name
    TSC22 domain family protein 1;TSC22 domain family protein 1-like;TSC22 domain family protein 3
    Primary source
    WormBase:WBGene00016269
    Locus tag
    CELE_C30G4.4
    See related
    AllianceGenome:WB:WBGene00016269
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to be involved in regulation of transcription by RNA polymerase II. Is expressed in isthmus. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See C30G4.4 in Genome Data Viewer
    Location:
    chromosome: X
    Exon count:
    13
    Sequence:
    Chromosome: X; NC_003284.9 (17056924..17072188, complement)

    Chromosome X - NC_003284.9Genomic Context describing neighboring genes Neighboring gene BTB domain-containing protein Neighboring gene Receptor-type guanylate cyclase gcy-11 Neighboring gene ncRNA Neighboring gene Receptor L-domain domain-containing protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003284.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Depletion of endogenously biotinylated carboxylases enhances the sensitivity of TurboID-mediated proximity labeling in Caenorhabditis elegans. Artan M, et al. J Biol Chem, 2022 Sep. PMID 35933017, Free PMC Article
    2. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    TSC22 domain family protein 1;TSC22 domain family protein 1-like;TSC22 domain family protein 3
    NP_001024437.2
    • Confirmed by transcript evidence
    NP_001024438.2
    • Partially confirmed by transcript evidence
    NP_001257282.2
    • Partially confirmed by transcript evidence
    NP_001294804.1
    • Partially confirmed by transcript evidence
    NP_001294805.1
    • Confirmed by transcript evidence
    NP_001294806.1
    • Confirmed by transcript evidence
    NP_001294807.1
    • Confirmed by transcript evidence
    NP_001294808.1
    • Confirmed by transcript evidence
    NP_001294809.1
    • Partially confirmed by transcript evidence
    NP_001294810.1
    • Partially confirmed by transcript evidence
    NP_001294811.1
    • Partially confirmed by transcript evidence
    NP_001294812.1
    • Partially confirmed by transcript evidence
    NP_001294813.1
    • Confirmed by transcript evidence
    NP_001294814.1
    • Confirmed by transcript evidence
    NP_001294815.1
    • Confirmed by transcript evidence
    NP_001294816.1
    • Confirmed by transcript evidence
    NP_001294817.1
    • Partially confirmed by transcript evidence
    NP_001294818.1
    • Confirmed by transcript evidence
    NP_001294819.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003284.9 Reference assembly

      Range
      17056924..17072188 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001029266.8 → NP_001024437.2  TSC22 domain family protein 1-like [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001024437.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q65ZH8
      Conserved Domains (1) summary
      pfam01166
      Location:289 → 344
      TSC22; TSC-22/dip/bun family

    2. NM_001307876.4 → NP_001294805.1  TSC22 domain family protein 1-like [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001294805.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A078BPF7
      Conserved Domains (1) summary
      pfam01166
      Location:280 → 335
      TSC22; TSC-22/dip/bun family

    3. NM_001307878.5 → NP_001294807.1  TSC22 domain family protein 1-like [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001294807.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A078BTK3
      Conserved Domains (1) summary
      pfam01166
      Location:293 → 348
      TSC22; TSC-22/dip/bun family

    4. NM_001307877.4 → NP_001294806.1  TSC22 domain family protein 1-like [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001294806.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A078BQJ7
      Conserved Domains (1) summary
      pfam01166
      Location:254 → 309
      TSC22; TSC-22/dip/bun family

    5. NM_001029267.6 → NP_001024438.2  TSC22 domain family protein 1-like [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001024438.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      H2KYK2
      Conserved Domains (1) summary
      pfam01166
      Location:263 → 318
      TSC22; TSC-22/dip/bun family

    6. NM_001307879.4 → NP_001294808.1  TSC22 domain family protein 1-like [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001294808.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A078BS39
      Conserved Domains (1) summary
      pfam01166
      Location:267 → 322
      TSC22; TSC-22/dip/bun family

    7. NM_001307875.3 → NP_001294804.1  TSC22 domain family protein 1-like [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001294804.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A078BPH7
      Conserved Domains (1) summary
      pfam01166
      Location:276 → 331
      TSC22; TSC-22/dip/bun family

    8. NM_001270353.4 → NP_001257282.2  TSC22 domain family protein 1-like [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001257282.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      H2KYK3
      Conserved Domains (1) summary
      pfam01166
      Location:302 → 357
      TSC22; TSC-22/dip/bun family

    9. NM_001307885.4 → NP_001294814.1  TSC22 domain family protein 1-like [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001294814.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A078BPI6
      Conserved Domains (1) summary
      pfam01166
      Location:143 → 198
      TSC22; TSC-22/dip/bun family

    10. NM_001307881.3 → NP_001294810.1  TSC22 domain family protein 1-like [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001294810.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A078BPG4
      Conserved Domains (1) summary
      pfam01166
      Location:152 → 207
      TSC22; TSC-22/dip/bun family

    11. NM_001307887.4 → NP_001294816.1  TSC22 domain family protein 1-like [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001294816.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A078BQK4
      Conserved Domains (1) summary
      pfam01166
      Location:156 → 211
      TSC22; TSC-22/dip/bun family

    12. NM_001307883.3 → NP_001294812.1  TSC22 domain family protein 1-like [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001294812.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A078BTK6
      Conserved Domains (1) summary
      pfam01166
      Location:165 → 220
      TSC22; TSC-22/dip/bun family

    13. NM_001307884.4 → NP_001294813.1  TSC22 domain family protein 1-like [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001294813.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A078BS43
      Conserved Domains (1) summary
      pfam01166
      Location:169 → 224
      TSC22; TSC-22/dip/bun family

    14. NM_001307880.3 → NP_001294809.1  TSC22 domain family protein 1-like [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001294809.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A078BPI1
      Conserved Domains (1) summary
      pfam01166
      Location:178 → 233
      TSC22; TSC-22/dip/bun family

    15. NM_001307886.4 → NP_001294815.1  TSC22 domain family protein 1-like [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001294815.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A078BPG8
      Conserved Domains (1) summary
      pfam01166
      Location:182 → 237
      TSC22; TSC-22/dip/bun family

    16. NM_001307882.3 → NP_001294811.1  TSC22 domain family protein 1-like [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001294811.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A078BQK0
      Conserved Domains (1) summary
      pfam01166
      Location:191 → 246
      TSC22; TSC-22/dip/bun family

    17. NM_001307889.3 → NP_001294818.1  TSC22 domain family protein 3 [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001294818.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A078BS47
      Conserved Domains (1) summary
      pfam01166
      Location:34 → 89
      TSC22; TSC-22/dip/bun family

    18. NM_001307888.3 → NP_001294817.1  TSC22 domain family protein 1 [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001294817.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A078BTK9
      Conserved Domains (1) summary
      pfam01166
      Location:43 → 98
      TSC22; TSC-22/dip/bun family

    19. NM_001307890.3 → NP_001294819.1  TSC22 domain family protein 1 [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001294819.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A078BPJ1
      Conserved Domains (1) summary
      pfam01166
      Location:1 → 56
      TSC22; TSC-22/dip/bun family
    Nucleotide Protein
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