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    bath-15 BTB and MATH domain-containing protein 15;BTB domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 182393, updated on 9-Dec-2024

    Summary

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    Official Symbol
    bath-15
    Official Full Name
    BTB and MATH domain-containing protein 15;BTB domain-containing protein
    Primary source
    WormBase:WBGene00015590
    Locus tag
    CELE_C08C3.2
    See related
    AllianceGenome:WB:WBGene00015590
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to be involved in protein ubiquitination. Is expressed in arcade cell; intestine; pharyngeal-intestinal valve; pharynx; and rectal gland cell. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See bath-15 in Genome Data Viewer
    Location:
    chromosome: III
    Exon count:
    5
    Sequence:
    Chromosome: III; NC_003281.10 (7774677..7776033, complement)

    Chromosome III - NC_003281.10Genomic Context describing neighboring genes Neighboring gene RING-type domain-containing protein Neighboring gene Uncharacterized protein Neighboring gene Homeobox protein mab-5 Neighboring gene Cytokinesis defective protein 7

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003281.10

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A unified mode of epigenetic gene silencing: RNA meets polycomb group proteins. Sun Y, et al. RNA Biol, 2005 Jan. PMID 17132931
    2. O-GlcNAcylation confers protection against Staphylococcus aureus infection in Caenorhabditis elegans through ubiquitination. Vigneshwari L, et al. RSC Adv, 2018 Jun 21. PMID 35540126, Free PMC Article
    3. BTB proteins are substrate-specific adaptors in an SCF-like modular ubiquitin ligase containing CUL-3. Xu L, et al. Nature, 2003 Sep 18. PMID 13679922
    4. Functional importance of an inverted formin C-terminal tail at morphologically dynamic epithelial junctions. Hegsted A, et al. Cytoskeleton (Hoboken), 2019 Apr. PMID 31215743, Free PMC Article
    5. Interactome analysis of Caenorhabditis elegans synapses by TurboID-based proximity labeling. Artan M, et al. J Biol Chem, 2021 Sep. PMID 34416233, Free PMC Article

    See all (7) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Process Evidence Code Pubs
    involved_in protein ubiquitination IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    BTB and MATH domain-containing protein 15;BTB domain-containing protein
    NP_001348656.1
    • Confirmed by transcript evidence
    NP_498694.2
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003281.10 Reference assembly

      Range
      7774677..7776033 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001361734.4 → NP_001348656.1  BTB domain-containing protein [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      P34324
      UniProtKB/TrEMBL
      A0A2K5ATM3
      Conserved Domains (2) summary
      pfam00917
      Location:14 → 127
      MATH; MATH domain
      pfam00651
      Location:141 → 245
      BTB; BTB/POZ domain

    2. NM_066293.8 → NP_498694.2  BTB and MATH domain-containing protein 15 [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_498694.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      P34324
      Conserved Domains (3) summary
      smart00225
      Location:148 → 243
      BTB; Broad-Complex, Tramtrack and Bric a brac
      pfam00651
      Location:139 → 240
      BTB; BTB/POZ domain
      pfam00917
      Location:14 → 125
      MATH; MATH domain
    Nucleotide Protein
    Heading Accession and Version

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