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    HELLS helicase, lymphoid specific [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 701598, updated on 14-Nov-2024

    Summary

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    Official Symbol
    HELLSprovided by VGNC
    Official Full Name
    helicase, lymphoid specificprovided by VGNC
    Primary source
    VGNC:VGNC:73362
    See related
    Ensembl:ENSMMUG00000017255
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See HELLS in Genome Data Viewer
    Location:
    chromosome: 9
    Exon count:
    23
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 9 NC_041762.1 (94718739..94774393)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 9 NC_027901.1 (89775804..89791633) , (89794446..89824235)

    Chromosome 9 - NC_041762.1Genomic Context describing neighboring genes Neighboring gene phospholipase C epsilon 1 Neighboring gene NOC3 like DNA replication regulator Neighboring gene TBC1 domain family member 12 Neighboring gene 40S ribosomal protein S11-like Neighboring gene cytochrome P450, family 2, subfamily C, polypeptide 18 Neighboring gene cytochrome P450 family 2 subfamily C member 18 Neighboring gene histone H2A.Z-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ATP-dependent chromatin remodeler activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables chromatin binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in DNA methylation-dependent constitutive heterochromatin formation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in lymphocyte proliferation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in negative regulation of gene expression via chromosomal CpG island methylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in pericentric heterochromatin formation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of pericentric heterochromatin IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    lymphoid-specific helicase

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001261757.1 → NP_001248686.1  lymphoid-specific helicase

      See identical proteins and their annotated locations for NP_001248686.1

      Status: PROVISIONAL

      Source sequence(s)
      JU475360
      UniProtKB/TrEMBL
      F7H9L3, G7N2L8, H9Z898
      Related
      ENSMMUP00000022698.4, ENSMMUT00000024254.4
      Conserved Domains (2) summary
      PLN03142
      Location:220 → 822
      PLN03142; Probable chromatin-remodeling complex ATPase chain; Provisional
      cd18009
      Location:219 → 452
      DEXHc_HELLS_SMARCA6; DEXH-box helicase domain of HELLS

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041762.1 Reference Mmul_10 Primary Assembly

      Range
      94718739..94774393
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028853360.1 → XP_028709193.1  lymphoid-specific helicase isoform X1

      UniProtKB/TrEMBL
      F7H9L1, G7N2L8
      Related
      ENSMMUP00000022699.4, ENSMMUT00000024255.4
      Conserved Domains (2) summary
      PLN03142
      Location:220 → 868
      PLN03142; Probable chromatin-remodeling complex ATPase chain; Provisional
      cd18009
      Location:219 → 498
      DEXHc_HELLS_SMARCA6; DEXH-box helicase domain of HELLS
    Nucleotide Protein
    Heading Accession and Version

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