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    BARHL2 BarH like homeobox 2 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 696831, updated on 17-Aug-2024

    Summary

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    Official Symbol
    BARHL2provided by VGNC
    Official Full Name
    BarH like homeobox 2provided by VGNC
    Primary source
    VGNC:VGNC:70227
    See related
    Ensembl:ENSMMUG00000053737
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See BARHL2 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 1 NC_041754.1 (133742585..133749009)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 1 NC_027893.1 (90922310..90928393, complement)

    Chromosome 1 - NC_041754.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC106999599 Neighboring gene uncharacterized LOC114671699 Neighboring gene small nucleolar RNA U3 Neighboring gene U4 spliceosomal RNA

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II transcription regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    barH-like 2 homeobox protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041754.1 Reference Mmul_10 Primary Assembly

      Range
      133742585..133749009
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001089467.3 → XP_001089467.1  barH-like 2 homeobox protein isoform X1

      UniProtKB/TrEMBL
      G7MHW0
      Conserved Domains (1) summary
      pfam00046
      Location:237 → 289
      Homeobox; Homeobox domain

    2. XM_028831550.1 → XP_028687383.1  barH-like 2 homeobox protein isoform X2

      UniProtKB/TrEMBL
      A0A5F8A8S0, G7MHW0
      Related
      ENSMMUP00000074337.1, ENSMMUT00000101824.1
      Conserved Domains (1) summary
      pfam00046
      Location:205 → 258
      Homeobox; Homeobox domain
    Nucleotide Protein
    Heading Accession and Version

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