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    TSFM Ts translation elongation factor, mitochondrial [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 715916, updated on 17-Aug-2024

    Summary

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    Official Symbol
    TSFMprovided by VGNC
    Official Full Name
    Ts translation elongation factor, mitochondrialprovided by VGNC
    Primary source
    VGNC:VGNC:78660
    See related
    Ensembl:ENSMMUG00000005893
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See TSFM in Genome Data Viewer
    Location:
    chromosome: 11
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 11 NC_041764.1 (57368849..57394509)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 11 NC_027903.1 (56589153..56614897)

    Chromosome 11 - NC_041764.1Genomic Context describing neighboring genes Neighboring gene cytochrome P450 family 27 subfamily B member 1 Neighboring gene EEF1A lysine methyltransferase 3 Neighboring gene methyltransferase 1, tRNA methylguanosine Neighboring gene U6 spliceosomal RNA Neighboring gene advillin Neighboring gene uncharacterized LOC114670873 Neighboring gene CTD small phosphatase 2 Neighboring gene microRNA mir-26a-2 Neighboring gene gem (nuclear organelle) associated protein 7

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables translation elongation factor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in mitochondrial translational elongation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in mitochondrial matrix IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    elongation factor Ts, mitochondrial

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041764.1 Reference Mmul_10 Primary Assembly

      Range
      57368849..57394509
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015152146.2 → XP_015007632.1  elongation factor Ts, mitochondrial isoform X2

      Conserved Domains (2) summary
      cd14275
      Location:48 → 84
      UBA_EF-Ts; UBA domain found in elongation factor Ts (EF-Ts) from bacteria, chloroplasts and mitochondria of eukaryotes
      pfam00889
      Location:117 → 142
      EF_TS; Elongation factor TS

    2. XM_015152147.2 → XP_015007633.1  elongation factor Ts, mitochondrial isoform X3

      UniProtKB/TrEMBL
      A0A1D5QPH6
      Conserved Domains (1) summary
      cl27004
      Location:48 → 142
      EF_TS; Elongation factor TS

    3. XM_001116504.4 → XP_001116504.3  elongation factor Ts, mitochondrial isoform X1

      UniProtKB/TrEMBL
      F7HSY3, H9F3S8
      Related
      ENSMMUP00000039298.2, ENSMMUT00000046256.3
      Conserved Domains (1) summary
      PRK09377
      Location:48 → 313
      tsf; elongation factor Ts; Provisional
    Nucleotide Protein
    Heading Accession and Version

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