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    CTR9 CTR9 homolog, Paf1/RNA polymerase II complex component [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 705748, updated on 17-Aug-2024

    Summary

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    Official Symbol
    CTR9provided by VGNC
    Official Full Name
    CTR9 homolog, Paf1/RNA polymerase II complex componentprovided by VGNC
    Primary source
    VGNC:VGNC:71424
    See related
    Ensembl:ENSMMUG00000011438
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See CTR9 in Genome Data Viewer
    Location:
    chromosome: 14
    Exon count:
    25
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 14 NC_041767.1 (54894382..54923316, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 14 NC_027906.1 (55693269..55720293, complement)

    Chromosome 14 - NC_041767.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC705269 Neighboring gene small nucleolar RNA SNORD97 Neighboring gene eukaryotic translation initiation factor 4 gamma 2 Neighboring gene inositol 1,4,5-triphosphate receptor associated 1 Neighboring gene uncharacterized LOC106993336 Neighboring gene lymphatic vessel endothelial hyaluronan receptor 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables RNA polymerase II complex binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of Cdc73/Paf1 complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    RNA polymerase-associated protein CTR9 homolog
    Names
    Ctr9, Paf1/RNA polymerase II complex component, homolog

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041767.1 Reference Mmul_10 Primary Assembly

      Range
      54894382..54923316 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028833686.1 → XP_028689519.1  RNA polymerase-associated protein CTR9 homolog

      UniProtKB/TrEMBL
      A0A5F7ZLJ6, A0A5S6RDA6, A0A8J8Y702, F7B9X6, G7NDX3
      Related
      ENSMMUP00000015006.4, ENSMMUT00000016013.4
      Conserved Domains (3) summary
      TIGR02917
      Location:110 → 781
      PEP_TPR_lipo; putative PEP-CTERM system TPR-repeat lipoprotein
      sd00006
      Location:501 → 525
      TPR; TPR repeat [structural motif]
      NF000535
      Location:971 → 1173
      MSCRAMM_SdrC; MSCRAMM family adhesin SdrC
    Nucleotide Protein
    Heading Accession and Version

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