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    TP53BP1 tumor protein p53 binding protein 1 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 710237, updated on 17-Aug-2024

    Summary

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    Official Symbol
    TP53BP1provided by VGNC
    Official Full Name
    tumor protein p53 binding protein 1provided by VGNC
    Primary source
    VGNC:VGNC:78628
    See related
    Ensembl:ENSMMUG00000017078
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See TP53BP1 in Genome Data Viewer
    Location:
    chromosome: 7
    Exon count:
    33
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 7 NC_041760.1 (19892076..20004091, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 7 NC_027899.1 (19815321..19925886, complement)

    Chromosome 7 - NC_041760.1Genomic Context describing neighboring genes Neighboring gene adenosine deaminase like Neighboring gene zinc finger and SCAN domain containing 29 Neighboring gene uncharacterized LOC114679387 Neighboring gene tubulin gamma complex component 4 Neighboring gene microtubule associated protein 1A Neighboring gene diphosphoinositol pentakisphosphate kinase 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables histone binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in DNA damage checkpoint signaling IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in positive regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    tumor suppressor p53-binding protein 1; TP53-binding protein 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041760.1 Reference Mmul_10 Primary Assembly

      Range
      19892076..20004091 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015142059.2 → XP_014997545.2  TP53-binding protein 1 isoform X2

      UniProtKB/TrEMBL
      G7MX08
      Conserved Domains (3) summary
      pfam09038
      Location:1483 → 1604
      53-BP1_Tudor; tumor suppressor p53-binding protein-1 Tudor
      cd17724
      Location:1868 → 1954
      BRCT_p53bp1_rpt2; Second (C-terminal) BRCT domain in p53-binding protein 1 (p53BP1) and similar proteins
      cd17745
      Location:1728 → 1839
      BRCT_p53bp1_rpt1; first (central) BRCT domain in p53-binding protein 1 (p53BP1) and similar proteins

    2. XM_015142057.2 → XP_014997543.2  TP53-binding protein 1 isoform X1

      UniProtKB/TrEMBL
      F7HJA9, H9EW55
      Related
      ENSMMUP00000022475.4, ENSMMUT00000024015.4
      Conserved Domains (3) summary
      pfam09038
      Location:1488 → 1609
      53-BP1_Tudor; tumor suppressor p53-binding protein-1 Tudor
      cd17724
      Location:1873 → 1959
      BRCT_p53bp1_rpt2; Second (C-terminal) BRCT domain in p53-binding protein 1 (p53BP1) and similar proteins
      cd17745
      Location:1733 → 1844
      BRCT_p53bp1_rpt1; first (central) BRCT domain in p53-binding protein 1 (p53BP1) and similar proteins

    3. XM_015142058.2 → XP_014997544.2  TP53-binding protein 1 isoform X2

      UniProtKB/TrEMBL
      G7MX08
      Conserved Domains (3) summary
      pfam09038
      Location:1483 → 1604
      53-BP1_Tudor; tumor suppressor p53-binding protein-1 Tudor
      cd17724
      Location:1868 → 1954
      BRCT_p53bp1_rpt2; Second (C-terminal) BRCT domain in p53-binding protein 1 (p53BP1) and similar proteins
      cd17745
      Location:1728 → 1839
      BRCT_p53bp1_rpt1; first (central) BRCT domain in p53-binding protein 1 (p53BP1) and similar proteins

    4. XM_028850806.1 → XP_028706639.1  TP53-binding protein 1 isoform X4

      Conserved Domains (3) summary
      pfam09038
      Location:528 → 649
      53-BP1_Tudor; tumor suppressor p53-binding protein-1 Tudor
      cd17724
      Location:913 → 999
      BRCT_p53bp1_rpt2; Second (C-terminal) BRCT domain in p53-binding protein 1 (p53BP1) and similar proteins
      cd17745
      Location:773 → 884
      BRCT_p53bp1_rpt1; first (central) BRCT domain in p53-binding protein 1 (p53BP1) and similar proteins

    5. XM_028850805.1 → XP_028706638.1  TP53-binding protein 1 isoform X3

      UniProtKB/TrEMBL
      F6VX15
      Related
      ENSMMUP00000033741.3, ENSMMUT00000040706.3
      Conserved Domains (1) summary
      pfam09038
      Location:1488 → 1609
      53-BP1_Tudor; tumor suppressor p53-binding protein-1 Tudor

    RNA

    1. XR_003731215.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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