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    SYT1 synaptotagmin 1 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 695390, updated on 17-Aug-2024

    Summary

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    Official Symbol
    SYT1provided by VGNC
    Official Full Name
    synaptotagmin 1provided by VGNC
    Primary source
    VGNC:VGNC:78074
    Locus tag
    EGK_03959
    See related
    Ensembl:ENSMMUG00000005530
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See SYT1 in Genome Data Viewer
    Location:
    chromosome: 11
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 11 NC_041764.1 (78464658..79062480)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 11 NC_027903.1 (77781512..78377928)

    Chromosome 11 - NC_041764.1Genomic Context describing neighboring genes Neighboring gene shieldin complex subunit 2 pseudogene Neighboring gene ras-related protein Ral-A pseudogene Neighboring gene RE1-silencing transcription factor-like Neighboring gene nucleolar protein 56-like Neighboring gene pro-apoptotic WT1 regulator

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653
    2. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables calcium ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables calcium-dependent phospholipid binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables clathrin binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables phosphatidylserine binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables syntaxin binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in calcium ion-regulated exocytosis of neurotransmitter IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in cellular response to calcium ion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of calcium ion-dependent exocytosis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of dopamine secretion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in synaptic vesicle endocytosis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in axon IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in dense core granule IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in synaptic vesicle membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    synaptotagmin-1
    Names
    synaptotagmin I

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041764.1 Reference Mmul_10 Primary Assembly

      Range
      78464658..79062480
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001084620.3 → XP_001084620.1  synaptotagmin-1 isoform X1

      See identical proteins and their annotated locations for XP_001084620.1

      UniProtKB/TrEMBL
      A0A8J8YQG8, F7CVX8, F7GFB1, G7N7Q8
      Related
      ENSMMUP00000039092.3, ENSMMUT00000046051.3
      Conserved Domains (3) summary
      cd08385
      Location:143 → 265
      C2A_Synaptotagmin-1-5-6-9-10; C2A domain first repeat present in Synaptotagmins 1, 5, 6, 9, and 10
      cd08402
      Location:274 → 409
      C2B_Synaptotagmin-1; C2 domain second repeat present in Synaptotagmin 1
      cd21963
      Location:6 → 113
      Syt1_N; N-terminal domain of synaptotagmin-1 (Syt1) and similar proteins

    2. XM_015152349.2 → XP_015007835.1  synaptotagmin-1 isoform X2

      UniProtKB/TrEMBL
      A0A5F8AJ31
      Conserved Domains (3) summary
      cd08385
      Location:140 → 262
      C2A_Synaptotagmin-1-5-6-9-10; C2A domain first repeat present in Synaptotagmins 1, 5, 6, 9, and 10
      cd08402
      Location:271 → 406
      C2B_Synaptotagmin-1; C2 domain second repeat present in Synaptotagmin 1
      cd21963
      Location:6 → 113
      Syt1_N; N-terminal domain of synaptotagmin-1 (Syt1) and similar proteins

    3. XM_015152348.2 → XP_015007834.1  synaptotagmin-1 isoform X2

      UniProtKB/TrEMBL
      A0A5F8AJ31
      Related
      ENSMMUP00000077913.1, ENSMMUT00000108515.1
      Conserved Domains (3) summary
      cd08385
      Location:140 → 262
      C2A_Synaptotagmin-1-5-6-9-10; C2A domain first repeat present in Synaptotagmins 1, 5, 6, 9, and 10
      cd08402
      Location:271 → 406
      C2B_Synaptotagmin-1; C2 domain second repeat present in Synaptotagmin 1
      cd21963
      Location:6 → 113
      Syt1_N; N-terminal domain of synaptotagmin-1 (Syt1) and similar proteins

    4. XM_015152346.2 → XP_015007832.1  synaptotagmin-1 isoform X1

      UniProtKB/TrEMBL
      A0A8J8YQG8, F7CVX8, F7GFB1, G7N7Q8
      Conserved Domains (3) summary
      cd08385
      Location:143 → 265
      C2A_Synaptotagmin-1-5-6-9-10; C2A domain first repeat present in Synaptotagmins 1, 5, 6, 9, and 10
      cd08402
      Location:274 → 409
      C2B_Synaptotagmin-1; C2 domain second repeat present in Synaptotagmin 1
      cd21963
      Location:6 → 113
      Syt1_N; N-terminal domain of synaptotagmin-1 (Syt1) and similar proteins
    Nucleotide Protein
    Heading Accession and Version

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