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    RGN regucalcin [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 705733, updated on 17-Aug-2024

    Summary

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    Official Symbol
    RGNprovided by VGNC
    Official Full Name
    regucalcinprovided by VGNC
    Primary source
    VGNC:VGNC:76912
    Locus tag
    EGK_20434
    See related
    Ensembl:ENSMMUG00000019546
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See RGN in Genome Data Viewer
    Location:
    chromosome: X
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) X NC_041774.1 (47040736..47057504)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) X NC_027913.1 (47235309..47251997)

    Chromosome X - NC_041774.1Genomic Context describing neighboring genes Neighboring gene RP2 activator of ARL3 GTPase Neighboring gene jade family PHD finger 3 Neighboring gene U6 spliceosomal RNA Neighboring gene uncharacterized LOC114674987 Neighboring gene U12 minor spliceosomal RNA

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653
    2. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables calcium ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables enzyme regulator activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables gluconolactonase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in L-ascorbic acid biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    regucalcin
    Names
    regucalcin (senescence marker protein-30)
    NP_001253240.1
    XP_014982726.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001266311.1 → NP_001253240.1  regucalcin

      See identical proteins and their annotated locations for NP_001253240.1

      Status: PROVISIONAL

      Source sequence(s)
      JU320995
      UniProtKB/TrEMBL
      A0A8J8Y5U7, F7BRS6, F7CQV0, G7NT35
      Related
      ENSMMUP00000041103.3, ENSMMUT00000048064.3
      Conserved Domains (3) summary
      cd05819
      Location:203 → 237
      NHL; NHL repeat [structural motif]
      pfam08450
      Location:16 → 264
      SGL; SMP-30/Gluconolaconase/LRE-like region
      cl18310
      Location:166 → 237
      NHL; NHL repeat unit of beta-propeller proteins

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041774.1 Reference Mmul_10 Primary Assembly

      Range
      47040736..47057504
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015127240.2 → XP_014982726.1  regucalcin isoform X1

      UniProtKB/TrEMBL
      A0A8J8Y5U7, F7BRS6, F7CQV0, G7NT35
      Related
      ENSMMUP00000025676.2, ENSMMUT00000027453.4
      Conserved Domains (3) summary
      cd05819
      Location:203 → 237
      NHL; NHL repeat [structural motif]
      pfam08450
      Location:16 → 264
      SGL; SMP-30/Gluconolaconase/LRE-like region
      cl18310
      Location:166 → 237
      NHL; NHL repeat unit of beta-propeller proteins
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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