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    SP2 Sp2 transcription factor [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 694834, updated on 17-Aug-2024

    Summary

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    Official Symbol
    SP2provided by VGNC
    Official Full Name
    Sp2 transcription factorprovided by VGNC
    Primary source
    VGNC:VGNC:77845
    See related
    Ensembl:ENSMMUG00000004765
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See SP2 in Genome Data Viewer
    Location:
    chromosome: 16
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 16 NC_041769.1 (48880918..48916799, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 16 NC_027908.1 (41981365..42017654, complement)

    Chromosome 16 - NC_041769.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC114673142 Neighboring gene proline rich 15 like Neighboring gene uncharacterized LOC106994018 Neighboring gene pyridoxamine 5'-phosphate oxidase Neighboring gene Sp6 transcription factor Neighboring gene secernin 2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    transcription factor Sp2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001257853.2 → NP_001244782.1  transcription factor Sp2

      See identical proteins and their annotated locations for NP_001244782.1

      Status: PROVISIONAL

      Source sequence(s)
      JU320853
      UniProtKB/TrEMBL
      F6SM71, F6SM94, H9EQF0
      Related
      ENSMMUP00000006330.4, ENSMMUT00000006728.4
      Conserved Domains (4) summary
      sd00017
      Location:530 → 549
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam00096
      Location:585 → 607
      zf-C2H2; Zinc finger, C2H2 type
      pfam13465
      Location:571 → 594
      zf-H2C2_2; Zinc-finger double domain
      cd22540
      Location:9 → 526
      SP2_N; N-terminal domain of transcription factor Specificity Protein (SP) 2

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041769.1 Reference Mmul_10 Primary Assembly

      Range
      48880918..48916799 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028835469.1 → XP_028691302.1  transcription factor Sp2 isoform X1

      UniProtKB/TrEMBL
      F6SM71, F6SM94, H9EQF0
      Conserved Domains (4) summary
      sd00017
      Location:530 → 549
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam00096
      Location:585 → 607
      zf-C2H2; Zinc finger, C2H2 type
      pfam13465
      Location:571 → 594
      zf-H2C2_2; Zinc-finger double domain
      cd22540
      Location:9 → 526
      SP2_N; N-terminal domain of transcription factor Specificity Protein (SP) 2

    2. XM_028835470.1 → XP_028691303.1  transcription factor Sp2 isoform X2

      UniProtKB/TrEMBL
      A0A5F7ZI02, F6SM71
      Related
      ENSMMUP00000065232.1, ENSMMUT00000085891.1
      Conserved Domains (4) summary
      sd00017
      Location:523 → 542
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam00096
      Location:578 → 600
      zf-C2H2; Zinc finger, C2H2 type
      pfam13465
      Location:564 → 587
      zf-H2C2_2; Zinc-finger double domain
      cd22540
      Location:2 → 519
      SP2_N; N-terminal domain of transcription factor Specificity Protein (SP) 2

    3. XM_028835471.1 → XP_028691304.1  transcription factor Sp2 isoform X2

      UniProtKB/TrEMBL
      A0A5F7ZI02, F6SM71
      Conserved Domains (4) summary
      sd00017
      Location:523 → 542
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam00096
      Location:578 → 600
      zf-C2H2; Zinc finger, C2H2 type
      pfam13465
      Location:564 → 587
      zf-H2C2_2; Zinc-finger double domain
      cd22540
      Location:2 → 519
      SP2_N; N-terminal domain of transcription factor Specificity Protein (SP) 2
    Nucleotide Protein
    Heading Accession and Version

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