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    SMC1A structural maintenance of chromosomes 1A [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 677711, updated on 17-Aug-2024

    Summary

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    Official Symbol
    SMC1Aprovided by VGNC
    Official Full Name
    structural maintenance of chromosomes 1Aprovided by VGNC
    Primary source
    VGNC:VGNC:77656
    Locus tag
    EGK_20525
    See related
    Ensembl:ENSMMUG00000009293
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Also known as
    SMC1L1
    Orthologs
    human mouse all
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    Genomic context

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    See SMC1A in Genome Data Viewer
    Location:
    chromosome: X
    Exon count:
    27
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) X NC_041774.1 (53101433..53165200, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) X NC_027913.1 (52776987..52840478, complement)

    Chromosome X - NC_041774.1Genomic Context describing neighboring genes Neighboring gene IQ motif and Sec7 domain ArfGEF 2 Neighboring gene 40S ribosomal protein SA-like Neighboring gene RIB43A domain with coiled-coils 1 Neighboring gene hydroxysteroid 17-beta dehydrogenase 10 Neighboring gene TIMELESS-interacting protein pseudogene

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Form deprivation modulates retinal neurogenesis in primate experimental myopia. Tkatchenko AV, et al. Proc Natl Acad Sci U S A, 2006 Mar 21. PMID 16537371, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ATP hydrolysis activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in sister chromatid cohesion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in chromosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of cohesin complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    structural maintenance of chromosomes protein 1A
    Names
    SMC1 structural maintenance of chromosomes 1-like 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041774.1 Reference Mmul_10 Primary Assembly

      Range
      53101433..53165200 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015127492.2 → XP_014982978.1  structural maintenance of chromosomes protein 1A isoform X1

      UniProtKB/TrEMBL
      A0A663D8X0, A0A8J8YSA0, F7H3K9, F7H3L1, G7NRH2
      Related
      ENSMMUP00000012177.4, ENSMMUT00000012991.4
      Conserved Domains (1) summary
      pfam02463
      Location:3 → 1210
      SMC_N; RecF/RecN/SMC N terminal domain

    2. XM_028842140.1 → XP_028697973.1  structural maintenance of chromosomes protein 1A isoform X2

      UniProtKB/TrEMBL
      A0A1D5QRI6
      Related
      ENSMMUP00000050664.2, ENSMMUT00000069599.2
      Conserved Domains (1) summary
      pfam02463
      Location:3 → 1147
      SMC_N; RecF/RecN/SMC N terminal domain

    RNA

    1. XR_003726014.1 RNA Sequence

    2. XR_001441985.2 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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    Molecular Biology Databases
    Research Materials