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    MEF2D myocyte enhancer factor 2D [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 718449, updated on 17-Aug-2024

    Summary

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    Official Symbol
    MEF2Dprovided by VGNC
    Official Full Name
    myocyte enhancer factor 2Dprovided by VGNC
    Primary source
    VGNC:VGNC:74699
    See related
    Ensembl:ENSMMUG00000016696
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See MEF2D in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    14
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 1 NC_041754.1 (94464562..94503154)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 1 NC_027893.1 (131057403..131121061, complement)

    Chromosome 1 - NC_041754.1Genomic Context describing neighboring genes Neighboring gene tetratricopeptide repeat domain 24 Neighboring gene IQ motif containing GTPase activating protein 3 Neighboring gene small nucleolar RNA U13 Neighboring gene U4 spliceosomal RNA Neighboring gene uncharacterized LOC106992900 Neighboring gene MIR9-1 host gene Neighboring gene microRNA mir-9-1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables histone deacetylase binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein dimerization activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cell differentiation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in positive regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    myocyte-specific enhancer factor 2D
    Names
    myocyte-specific enhancer factor 2D-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041754.1 Reference Mmul_10 Primary Assembly

      Range
      94464562..94503154
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028827653.1 → XP_028683486.1  myocyte-specific enhancer factor 2D isoform X1

      UniProtKB/TrEMBL
      G7ME00
      Conserved Domains (2) summary
      cd00265
      Location:2 → 78
      MADS_MEF2_like; MEF2 (myocyte enhancer factor 2)-like/Type II subfamily of MADS ( MCM1, Agamous, Deficiens, and SRF (serum response factor) box family of eukaryotic transcriptional regulators. Binds DNA and exists as hetero and homo-dimers. Differs from SRF-like/Type I ...
      pfam12347
      Location:97 → 151
      HJURP_C; Holliday junction regulator protein family C-terminal repeat

    2. XM_028827698.1 → XP_028683531.1  myocyte-specific enhancer factor 2D isoform X9

      UniProtKB/TrEMBL
      H9F0H7
      Conserved Domains (3) summary
      PHA03247
      Location:126 → 257
      PHA03247; large tegument protein UL36; Provisional
      cd00265
      Location:2 → 78
      MADS_MEF2_like; MEF2 (myocyte enhancer factor 2)-like/Type II subfamily of MADS ( MCM1, Agamous, Deficiens, and SRF (serum response factor) box family of eukaryotic transcriptional regulators. Binds DNA and exists as hetero and homo-dimers. Differs from SRF-like/Type I ...
      pfam12347
      Location:97 → 151
      HJURP_C; Holliday junction regulator protein family C-terminal repeat

    3. XM_015112112.2 → XP_014967598.1  myocyte-specific enhancer factor 2D isoform X4

      UniProtKB/TrEMBL
      F6VKY1, G7ME00, I2CY53
      Related
      ENSMMUP00000021952.3, ENSMMUT00000023462.4
      Conserved Domains (2) summary
      cd00265
      Location:2 → 78
      MADS_MEF2_like; MEF2 (myocyte enhancer factor 2)-like/Type II subfamily of MADS ( MCM1, Agamous, Deficiens, and SRF (serum response factor) box family of eukaryotic transcriptional regulators. Binds DNA and exists as hetero and homo-dimers. Differs from SRF-like/Type I ...
      pfam12347
      Location:97 → 151
      HJURP_C; Holliday junction regulator protein family C-terminal repeat

    4. XM_028827668.1 → XP_028683501.1  myocyte-specific enhancer factor 2D isoform X3

      UniProtKB/TrEMBL
      G7ME00
      Conserved Domains (2) summary
      cd00265
      Location:2 → 78
      MADS_MEF2_like; MEF2 (myocyte enhancer factor 2)-like/Type II subfamily of MADS ( MCM1, Agamous, Deficiens, and SRF (serum response factor) box family of eukaryotic transcriptional regulators. Binds DNA and exists as hetero and homo-dimers. Differs from SRF-like/Type I ...
      pfam12347
      Location:97 → 151
      HJURP_C; Holliday junction regulator protein family C-terminal repeat

    5. XM_015112125.2 → XP_014967611.1  myocyte-specific enhancer factor 2D isoform X6

      UniProtKB/TrEMBL
      F6VLM2, G7ME00
      Related
      ENSMMUP00000021949.3, ENSMMUT00000023459.4
      Conserved Domains (2) summary
      cd00265
      Location:2 → 78
      MADS_MEF2_like; MEF2 (myocyte enhancer factor 2)-like/Type II subfamily of MADS ( MCM1, Agamous, Deficiens, and SRF (serum response factor) box family of eukaryotic transcriptional regulators. Binds DNA and exists as hetero and homo-dimers. Differs from SRF-like/Type I ...
      pfam12347
      Location:97 → 152
      HJURP_C; Holliday junction regulator protein family C-terminal repeat

    6. XM_028827665.1 → XP_028683498.1  myocyte-specific enhancer factor 2D isoform X2

      UniProtKB/TrEMBL
      G7ME00
      Conserved Domains (3) summary
      COG5068
      Location:1 → 254
      ARG80; Regulator of arginine metabolism and related MADS box-containing transcription factors [Transcription]
      cd00265
      Location:2 → 78
      MADS_MEF2_like; MEF2 (myocyte enhancer factor 2)-like/Type II subfamily of MADS ( MCM1, Agamous, Deficiens, and SRF (serum response factor) box family of eukaryotic transcriptional regulators. Binds DNA and exists as hetero and homo-dimers. Differs from SRF-like/Type I ...
      pfam12347
      Location:104 → 150
      HJURP_C; Holliday junction regulator protein family C-terminal repeat

    7. XM_015112119.2 → XP_014967605.1  myocyte-specific enhancer factor 2D isoform X5

      UniProtKB/TrEMBL
      F6VKZ8, G7ME00
      Related
      ENSMMUP00000021950.4, ENSMMUT00000023460.4
      Conserved Domains (2) summary
      cd00265
      Location:2 → 78
      MADS_MEF2_like; MEF2 (myocyte enhancer factor 2)-like/Type II subfamily of MADS ( MCM1, Agamous, Deficiens, and SRF (serum response factor) box family of eukaryotic transcriptional regulators. Binds DNA and exists as hetero and homo-dimers. Differs from SRF-like/Type I ...
      pfam12347
      Location:96 → 151
      HJURP_C; Holliday junction regulator protein family C-terminal repeat

    8. XM_015112133.2 → XP_014967619.1  myocyte-specific enhancer factor 2D isoform X7

      UniProtKB/TrEMBL
      G7ME00
      Conserved Domains (3) summary
      COG5068
      Location:1 → 345
      ARG80; Regulator of arginine metabolism and related MADS box-containing transcription factors [Transcription]
      cd00265
      Location:2 → 78
      MADS_MEF2_like; MEF2 (myocyte enhancer factor 2)-like/Type II subfamily of MADS ( MCM1, Agamous, Deficiens, and SRF (serum response factor) box family of eukaryotic transcriptional regulators. Binds DNA and exists as hetero and homo-dimers. Differs from SRF-like/Type I ...
      pfam12347
      Location:96 → 151
      HJURP_C; Holliday junction regulator protein family C-terminal repeat

    9. XM_028827694.1 → XP_028683527.1  myocyte-specific enhancer factor 2D isoform X8

      UniProtKB/TrEMBL
      G7ME00
      Conserved Domains (2) summary
      COG5068
      Location:1 → 156
      ARG80; Regulator of arginine metabolism and related MADS box-containing transcription factors [Transcription]
      cd00265
      Location:2 → 78
      MADS_MEF2_like; MEF2 (myocyte enhancer factor 2)-like/Type II subfamily of MADS ( MCM1, Agamous, Deficiens, and SRF (serum response factor) box family of eukaryotic transcriptional regulators. Binds DNA and exists as hetero and homo-dimers. Differs from SRF-like/Type I ...

    10. XM_028827659.1 → XP_028683492.1  myocyte-specific enhancer factor 2D isoform X1

      UniProtKB/TrEMBL
      G7ME00
      Conserved Domains (2) summary
      cd00265
      Location:2 → 78
      MADS_MEF2_like; MEF2 (myocyte enhancer factor 2)-like/Type II subfamily of MADS ( MCM1, Agamous, Deficiens, and SRF (serum response factor) box family of eukaryotic transcriptional regulators. Binds DNA and exists as hetero and homo-dimers. Differs from SRF-like/Type I ...
      pfam12347
      Location:97 → 151
      HJURP_C; Holliday junction regulator protein family C-terminal repeat

    11. XM_028827655.1 → XP_028683488.1  myocyte-specific enhancer factor 2D isoform X1

      UniProtKB/TrEMBL
      G7ME00
      Conserved Domains (2) summary
      cd00265
      Location:2 → 78
      MADS_MEF2_like; MEF2 (myocyte enhancer factor 2)-like/Type II subfamily of MADS ( MCM1, Agamous, Deficiens, and SRF (serum response factor) box family of eukaryotic transcriptional regulators. Binds DNA and exists as hetero and homo-dimers. Differs from SRF-like/Type I ...
      pfam12347
      Location:97 → 151
      HJURP_C; Holliday junction regulator protein family C-terminal repeat
    Nucleotide Protein
    Heading Accession and Version

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