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    FBXO38 F-box protein 38 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 709869, updated on 17-Aug-2024

    Summary

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    Official Symbol
    FBXO38provided by VGNC
    Official Full Name
    F-box protein 38provided by VGNC
    Primary source
    VGNC:VGNC:72590
    Locus tag
    EGK_17002
    See related
    Ensembl:ENSMMUG00000016908
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See FBXO38 in Genome Data Viewer
    Location:
    chromosome: 6
    Exon count:
    25
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 6 NC_041759.1 (145890446..145969467)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 6 NC_027898.1 (146499073..146578183)

    Chromosome 6 - NC_041759.1Genomic Context describing neighboring genes Neighboring gene serine peptidase inhibitor Kazal type 7 Neighboring gene serine peptidase inhibitor Kazal type 9 Neighboring gene uncharacterized LOC114678939 Neighboring gene 5-hydroxytryptamine receptor 4 Neighboring gene adrenoceptor beta 2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in SCF-dependent proteasomal ubiquitin-dependent protein catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in protein K48-linked ubiquitination IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    F-box only protein 38

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041759.1 Reference Mmul_10 Primary Assembly

      Range
      145890446..145969467
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015141204.2 → XP_014996690.1  F-box only protein 38 isoform X1

      UniProtKB/TrEMBL
      A0A5F8A0S0, A0A5K1VLY8, A0A8J8YDI5, F7CPV0, G7MVF7
      Conserved Domains (1) summary
      pfam00646
      Location:32 → 65
      F-box; F-box domain

    2. XM_015141203.2 → XP_014996689.1  F-box only protein 38 isoform X1

      UniProtKB/TrEMBL
      A0A5F8A0S0, A0A5K1VLY8, A0A8J8YDI5, F7CPV0, G7MVF7
      Related
      ENSMMUP00000022226.4, ENSMMUT00000023749.4
      Conserved Domains (1) summary
      pfam00646
      Location:32 → 65
      F-box; F-box domain

    3. XM_001104379.3 → XP_001104379.2  F-box only protein 38 isoform X3

      UniProtKB/TrEMBL
      A0A5K1VLY8, H9G081
      Conserved Domains (1) summary
      pfam00646
      Location:32 → 65
      F-box; F-box domain

    4. XM_001104218.3 → XP_001104218.2  F-box only protein 38 isoform X4

      Conserved Domains (1) summary
      pfam00646
      Location:32 → 65
      F-box; F-box domain

    5. XM_015141202.2 → XP_014996688.1  F-box only protein 38 isoform X1

      UniProtKB/TrEMBL
      A0A5F8A0S0, A0A5K1VLY8, A0A8J8YDI5, F7CPV0, G7MVF7
      Related
      ENSMMUP00000070498.1, ENSMMUT00000096918.1
      Conserved Domains (1) summary
      pfam00646
      Location:32 → 65
      F-box; F-box domain

    6. XM_015141205.2 → XP_014996691.1  F-box only protein 38 isoform X2

      UniProtKB/TrEMBL
      A0A5K1VLY8
      Conserved Domains (1) summary
      pfam00646
      Location:32 → 65
      F-box; F-box domain

    7. XM_028849825.1 → XP_028705658.1  F-box only protein 38 isoform X1

      UniProtKB/TrEMBL
      A0A5F8A0S0, A0A5K1VLY8, A0A8J8YDI5, F7CPV0, G7MVF7
      Conserved Domains (1) summary
      pfam00646
      Location:32 → 65
      F-box; F-box domain
    Nucleotide Protein
    Heading Accession and Version

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