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    RIN1 Ras and Rab interactor 1 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 714321, updated on 17-Aug-2024

    Summary

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    Official Symbol
    RIN1provided by VGNC
    Official Full Name
    Ras and Rab interactor 1provided by VGNC
    Primary source
    VGNC:VGNC:76769
    See related
    Ensembl:ENSMMUG00000015987
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See RIN1 in Genome Data Viewer
    Location:
    chromosome: 14
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 14 NC_041767.1 (8222000..8227118)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 14 NC_027906.1 (8095096..8100170)

    Chromosome 14 - NC_041767.1Genomic Context describing neighboring genes Neighboring gene beta-1,4-glucuronyltransferase 1 Neighboring gene uncharacterized LOC114672226 Neighboring gene BRMS1 transcriptional repressor and anoikis regulator Neighboring gene CD248 molecule Neighboring gene transmembrane protein 151A

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables guanyl-nucleotide exchange factor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables small GTPase binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in signal transduction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in vesicle-mediated transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytosol IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in endocytic vesicle IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ras and Rab interactor 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041767.1 Reference Mmul_10 Primary Assembly

      Range
      8222000..8227118
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028833210.1 → XP_028689043.1  ras and Rab interactor 1 isoform X3

      UniProtKB/TrEMBL
      I2CTK9
      Conserved Domains (3) summary
      smart00167
      Location:384 → 502
      VPS9; Domain present in VPS9
      cl15255
      Location:1 → 53
      SH2; Src homology 2 (SH2) domain
      cl28922
      Location:520 → 600
      Ubiquitin_like_fold; Beta-grasp ubiquitin-like fold

    2. XM_001110464.3 → XP_001110464.3  ras and Rab interactor 1 isoform X1

      UniProtKB/TrEMBL
      A0A5S6RDH4, A0A8J8XW59, F6XMS0, G7NC63, I2CTK9
      Related
      ENSMMUP00000021030.4, ENSMMUT00000022480.4
      Conserved Domains (3) summary
      smart00167
      Location:489 → 607
      VPS9; Domain present in VPS9
      cd10393
      Location:58 → 158
      SH2_RIN1; Src homology 2 (SH2) domain found in Ras and Rab interactor 1 (RIN1)-like proteins
      cl28922
      Location:625 → 705
      Ubiquitin_like_fold; Beta-grasp ubiquitin-like fold

    3. XM_015113643.2 → XP_014969129.2  ras and Rab interactor 1 isoform X3

      UniProtKB/TrEMBL
      I2CTK9
      Conserved Domains (3) summary
      smart00167
      Location:384 → 502
      VPS9; Domain present in VPS9
      cl15255
      Location:1 → 53
      SH2; Src homology 2 (SH2) domain
      cl28922
      Location:520 → 600
      Ubiquitin_like_fold; Beta-grasp ubiquitin-like fold

    4. XM_028833209.1 → XP_028689042.1  ras and Rab interactor 1 isoform X2

      UniProtKB/TrEMBL
      I2CTK9
      Conserved Domains (3) summary
      smart00167
      Location:465 → 583
      VPS9; Domain present in VPS9
      cd10393
      Location:34 → 134
      SH2_RIN1; Src homology 2 (SH2) domain found in Ras and Rab interactor 1 (RIN1)-like proteins
      cl28922
      Location:601 → 681
      Ubiquitin_like_fold; Beta-grasp ubiquitin-like fold
    Nucleotide Protein
    Heading Accession and Version

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