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    SIGMAR1 sigma non-opioid intracellular receptor 1 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 700469, updated on 17-Aug-2024

    Summary

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    Official Symbol
    SIGMAR1provided by VGNC
    Official Full Name
    sigma non-opioid intracellular receptor 1provided by VGNC
    Primary source
    VGNC:VGNC:77361
    Locus tag
    EGK_07597
    See related
    Ensembl:ENSMMUG00000020774
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See SIGMAR1 in Genome Data Viewer
    Location:
    chromosome: 15
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 15 NC_041768.1 (49565102..49575804)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 15 NC_027907.1 (49630008..49632715)

    Chromosome 15 - NC_041768.1Genomic Context describing neighboring genes Neighboring gene interleukin 11 receptor subunit alpha Neighboring gene galactose-1-phosphate uridylyltransferase Neighboring gene uncharacterized LOC114672768 Neighboring gene AT-rich interaction domain 3C Neighboring gene dynactin subunit 3

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653
    2. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Component Evidence Code Pubs
    located_in endoplasmic reticulum IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    sigma non-opioid intracellular receptor 1
    Names
    Sigma 1-type opioid receptor

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001257877.1 → NP_001244806.1  sigma non-opioid intracellular receptor 1

      See identical proteins and their annotated locations for NP_001244806.1

      Status: PROVISIONAL

      Source sequence(s)
      JU320933
      UniProtKB/TrEMBL
      A0A8J8YNH2, F7HC83, G7NFL2, H9YZR4
      Related
      ENSMMUP00000027341.1, ENSMMUT00000029220.3
      Conserved Domains (1) summary
      pfam04622
      Location:24 → 214
      ERG2_Sigma1R; ERG2 and Sigma1 receptor like protein

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041768.1 Reference Mmul_10 Primary Assembly

      Range
      49565102..49575804
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028834256.1 → XP_028690089.1  sigma non-opioid intracellular receptor 1 isoform X1

      Conserved Domains (1) summary
      pfam04622
      Location:24 → 174
      ERG2_Sigma1R; ERG2 and Sigma1 receptor like protein

    RNA

    1. XR_003722998.1 RNA Sequence

    2. XR_003722997.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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