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    PTCHD3 patched domain containing 3 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 715111, updated on 17-Aug-2024

    Summary

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    Official Symbol
    PTCHD3provided by VGNC
    Official Full Name
    patched domain containing 3provided by VGNC
    Primary source
    VGNC:VGNC:76310
    See related
    Ensembl:ENSMMUG00000020657
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See PTCHD3 in Genome Data Viewer
    Location:
    chromosome: 9
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 9 NC_041762.1 (28231366..28249886, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 9 NC_027901.1 (27358034..27376543, complement)

    Chromosome 9 - NC_041762.1Genomic Context describing neighboring genes Neighboring gene leucine-rich repeat-containing protein 37A3 pseudogene Neighboring gene protein FAM210B, mitochondrial-like Neighboring gene RAB18, member RAS oncogene family Neighboring gene mohawk homeobox

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    patched domain-containing protein 3

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041762.1 Reference Mmul_10 Primary Assembly

      Range
      28231366..28249886 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015146674.2 → XP_015002160.1  patched domain-containing protein 3

      UniProtKB/TrEMBL
      F7BF08
      Related
      ENSMMUP00000027185.3, ENSMMUT00000029057.3
      Conserved Domains (3) summary
      pfam02460
      Location:172 → 953
      Patched; Patched family
      cl02544
      Location:609 → 687
      VHS_ENTH_ANTH; VHS, ENTH and ANTH domain superfamily; composed of proteins containing a VHS, ENTH or ANTH domain. The VHS domain is present in Vps27 (Vacuolar Protein Sorting), Hrs (Hepatocyte growth factor-regulated tyrosine kinase substrate) and STAM (Signal ...
      cl21543
      Location:408 → 546
      MMPL; MMPL family
    Nucleotide Protein
    Heading Accession and Version

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