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    OPTC opticin [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 702570, updated on 17-Aug-2024

    Summary

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    Official Symbol
    OPTCprovided by VGNC
    Official Full Name
    opticinprovided by VGNC
    Primary source
    VGNC:VGNC:75590
    See related
    Ensembl:ENSMMUG00000021640
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See OPTC in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 1 NC_041754.1 (61005479..61015335)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 1 NC_027893.1 (163121273..163132268, complement)

    Chromosome 1 - NC_041754.1Genomic Context describing neighboring genes Neighboring gene 40S ribosomal protein S27-like Neighboring gene proline and arginine rich end leucine rich repeat protein Neighboring gene ATPase plasma membrane Ca2+ transporting 4 Neighboring gene ribosome biogenesis protein NSA2 homolog pseudogene Neighboring gene small nucleolar RNA SNORA77

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    opticin

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041754.1 Reference Mmul_10 Primary Assembly

      Range
      61005479..61015335
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015119816.2 → XP_014975302.2  opticin

      UniProtKB/TrEMBL
      F7DZ16, G7MEW1
      Related
      ENSMMUP00000028499.4, ENSMMUT00000030455.4
      Conserved Domains (3) summary
      PRK15370
      Location:117 → 327
      PRK15370; E3 ubiquitin-protein ligase SlrP; Provisional
      sd00033
      Location:155 → 178
      LRR_RI; leucine-rich repeat [structural motif]
      pfam13855
      Location:157 → 213
      LRR_8; Leucine rich repeat
    Nucleotide Protein
    Heading Accession and Version

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