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    WIPI2 WD repeat domain, phosphoinositide interacting 2 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 702966, updated on 17-Aug-2024

    Summary

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    Official Symbol
    WIPI2provided by VGNC
    Official Full Name
    WD repeat domain, phosphoinositide interacting 2provided by VGNC
    Primary source
    VGNC:VGNC:79918
    See related
    Ensembl:ENSMMUG00000007045
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See WIPI2 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    14
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 3 NC_041756.1 (38281923..38328800)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 3 NC_027895.1 (39829211..39873596, complement)

    Chromosome 3 - NC_041756.1Genomic Context describing neighboring genes Neighboring gene putative speedy protein E7 Neighboring gene RB associated KRAB zinc finger Neighboring gene uncharacterized LOC100430902 Neighboring gene solute carrier family 29 member 4 Neighboring gene trinucleotide repeat containing 18

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables phosphatidylinositol-3,5-bisphosphate binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables phosphatidylinositol-3-phosphate binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in autophagy of mitochondrion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in nucleophagy IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in protein lipidation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in protein localization to phagophore assembly site IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytosol IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in extrinsic component of membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in phagophore assembly site membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    WD repeat domain phosphoinositide-interacting protein 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041756.1 Reference Mmul_10 Primary Assembly

      Range
      38281923..38328800
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028845087.1 → XP_028700920.1  WD repeat domain phosphoinositide-interacting protein 2 isoform X5

      UniProtKB/TrEMBL
      G7MNM9, H9ES41
      Conserved Domains (2) summary
      COG2319
      Location:21 → 272
      WD40; WD40 repeat [General function prediction only]
      sd00039
      Location:143 → 182
      7WD40; WD40 repeat [structural motif]

    2. XM_028845088.1 → XP_028700921.1  WD repeat domain phosphoinositide-interacting protein 2 isoform X6

      UniProtKB/TrEMBL
      F7F192, H9ES08
      Related
      ENSMMUP00000073925.1, ENSMMUT00000102965.1
      Conserved Domains (2) summary
      COG2319
      Location:21 → 272
      WD40; WD40 repeat [General function prediction only]
      sd00039
      Location:143 → 182
      7WD40; WD40 repeat [structural motif]

    3. XM_028845085.1 → XP_028700918.1  WD repeat domain phosphoinositide-interacting protein 2 isoform X3

      UniProtKB/TrEMBL
      G7MNM9, H9YUR2
      Conserved Domains (2) summary
      COG2319
      Location:37 → 290
      WD40; WD40 repeat [General function prediction only]
      sd00039
      Location:161 → 200
      7WD40; WD40 repeat [structural motif]

    4. XM_028845086.1 → XP_028700919.1  WD repeat domain phosphoinositide-interacting protein 2 isoform X4

      UniProtKB/TrEMBL
      G7MNM9
      Conserved Domains (2) summary
      COG2319
      Location:37 → 290
      WD40; WD40 repeat [General function prediction only]
      sd00039
      Location:161 → 200
      7WD40; WD40 repeat [structural motif]

    5. XM_028845089.1 → XP_028700922.1  WD repeat domain phosphoinositide-interacting protein 2 isoform X7

      Conserved Domains (2) summary
      sd00039
      Location:17 → 56
      7WD40; WD40 repeat [structural motif]
      cl29593
      Location:40 → 219
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

    6. XM_028845083.1 → XP_028700916.1  WD repeat domain phosphoinositide-interacting protein 2 isoform X1

      UniProtKB/TrEMBL
      A0A5F8A3Z8, G7MNM9
      Related
      ENSMMUP00000072663.1, ENSMMUT00000098744.1
      Conserved Domains (2) summary
      COG2319
      Location:21 → 303
      WD40; WD40 repeat [General function prediction only]
      sd00039
      Location:174 → 213
      7WD40; WD40 repeat [structural motif]

    7. XM_028845084.1 → XP_028700917.1  WD repeat domain phosphoinositide-interacting protein 2 isoform X2

      UniProtKB/TrEMBL
      F7F192
      Related
      ENSMMUP00000009240.4, ENSMMUT00000009841.4
      Conserved Domains (2) summary
      COG2319
      Location:21 → 303
      WD40; WD40 repeat [General function prediction only]
      sd00039
      Location:174 → 213
      7WD40; WD40 repeat [structural motif]
    Nucleotide Protein
    Heading Accession and Version

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