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    RRP9 ribosomal RNA processing 9, U3 small nucleolar RNA binding protein [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 699421, updated on 17-Aug-2024

    Summary

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    Official Symbol
    RRP9provided by VGNC
    Official Full Name
    ribosomal RNA processing 9, U3 small nucleolar RNA binding proteinprovided by VGNC
    Primary source
    VGNC:VGNC:77028
    See related
    Ensembl:ENSMMUG00000003644
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Also known as
    RNU3IP2
    Orthologs
    human mouse all
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    Genomic context

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    See RRP9 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    15
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 2 NC_041755.1 (108060936..108070193, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 2 NC_027894.1 (90295148..90304090)

    Chromosome 2 - NC_041755.1Genomic Context describing neighboring genes Neighboring gene IQ motif containing F5 Neighboring gene IQ motif containing F1 Neighboring gene poly(ADP-ribose) polymerase family member 3 Neighboring gene uncharacterized LOC114676357 Neighboring gene G protein-coupled receptor 62

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables snoRNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of small-subunit processome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    U3 small nucleolar RNA-interacting protein 2
    Names
    RNA, U3 small nucleolar interacting protein 2
    ribosomal RNA processing 9, small subunit (SSU) processome component, homolog

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041755.1 Reference Mmul_10 Primary Assembly

      Range
      108060936..108070193 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015130775.2 → XP_014986261.1  U3 small nucleolar RNA-interacting protein 2

      UniProtKB/TrEMBL
      A0A5F8A2L3, F6PY48, H9G1P5
      Related
      ENSMMUP00000004862.3, ENSMMUT00000005161.4
      Conserved Domains (2) summary
      cd00200
      Location:138 → 438
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
      sd00039
      Location:148 → 196
      7WD40; WD40 repeat [structural motif]
    Nucleotide Protein
    Heading Accession and Version

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