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    MINDY1 MINDY lysine 48 deubiquitinase 1 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 716225, updated on 17-Aug-2024

    Summary

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    Official Symbol
    MINDY1provided by VGNC
    Official Full Name
    MINDY lysine 48 deubiquitinase 1provided by VGNC
    Primary source
    VGNC:VGNC:74828
    Locus tag
    EGK_01243
    See related
    Ensembl:ENSMMUG00000010067
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Also known as
    FAM63A
    Orthologs
    human mouse all
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    Genomic context

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    See MINDY1 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 1 NC_041754.1 (100119185..100129857)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 1 NC_027893.1 (125466236..125477188, complement)

    Chromosome 1 - NC_041754.1Genomic Context describing neighboring genes Neighboring gene chromosome 1 C1orf56 homolog Neighboring gene BCL2 interacting protein like Neighboring gene prune exopolyphosphatase 1 Neighboring gene U6 spliceosomal RNA Neighboring gene annexin A9 Neighboring gene ceramide synthase 2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables K48-linked deubiquitinase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables cysteine-type carboxypeptidase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables cysteine-type deubiquitinase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein K48-linked deubiquitination IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cell periphery IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in cytosol IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ubiquitin carboxyl-terminal hydrolase MINDY-1
    Names
    family with sequence similarity 63 member A

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041754.1 Reference Mmul_10 Primary Assembly

      Range
      100119185..100129857
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015151829.2 → XP_015007315.2  ubiquitin carboxyl-terminal hydrolase MINDY-1 isoform X4

      UniProtKB/TrEMBL
      A0A5F8ADN5, G7MDI8
      Conserved Domains (1) summary
      pfam04424
      Location:141 → 258
      MINDY_DUB; MINDY deubiquitinase

    2. XM_028829207.1 → XP_028685040.1  ubiquitin carboxyl-terminal hydrolase MINDY-1 isoform X1

      Conserved Domains (1) summary
      pfam04424
      Location:141 → 259
      MINDY_DUB; MINDY deubiquitinase

    3. XM_028829204.1 → XP_028685037.1  ubiquitin carboxyl-terminal hydrolase MINDY-1 isoform X1

      Conserved Domains (1) summary
      pfam04424
      Location:141 → 259
      MINDY_DUB; MINDY deubiquitinase

    4. XM_028829213.1 → XP_028685046.1  ubiquitin carboxyl-terminal hydrolase MINDY-1 isoform X2

      Conserved Domains (1) summary
      pfam04424
      Location:141 → 258
      MINDY_DUB; MINDY deubiquitinase

    5. XM_015151822.2 → XP_015007308.2  ubiquitin carboxyl-terminal hydrolase MINDY-1 isoform X4

      UniProtKB/TrEMBL
      A0A5F8ADN5, G7MDI8
      Related
      ENSMMUP00000075982.1, ENSMMUT00000094464.1
      Conserved Domains (1) summary
      pfam04424
      Location:141 → 258
      MINDY_DUB; MINDY deubiquitinase

    6. XM_015151818.2 → XP_015007304.2  ubiquitin carboxyl-terminal hydrolase MINDY-1 isoform X3

      UniProtKB/TrEMBL
      G7MDI8
      Conserved Domains (1) summary
      pfam04424
      Location:141 → 259
      MINDY_DUB; MINDY deubiquitinase

    7. XM_015151838.2 → XP_015007324.2  ubiquitin carboxyl-terminal hydrolase MINDY-1 isoform X5

      UniProtKB/TrEMBL
      G7MDI8
      Conserved Domains (1) summary
      pfam04424
      Location:189 → 306
      MINDY_DUB; MINDY deubiquitinase
    Nucleotide Protein
    Heading Accession and Version

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