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    KNL1 kinetochore scaffold 1 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 708271, updated on 17-Aug-2024

    Summary

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    Official Symbol
    KNL1provided by VGNC
    Official Full Name
    kinetochore scaffold 1provided by VGNC
    Primary source
    VGNC:VGNC:84366
    See related
    Ensembl:ENSMMUG00000048910
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See KNL1 in Genome Data Viewer
    Location:
    chromosome: 7
    Exon count:
    27
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 7 NC_041760.1 (17030188..17104132)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 7 NC_027899.1 (16943429..17019314)

    Chromosome 7 - NC_041760.1Genomic Context describing neighboring genes Neighboring gene coiled-coil domain containing 32 Neighboring gene RNA pseudouridine synthase domain containing 2 Neighboring gene transfer RNA serine (anticodon GCU) Neighboring gene small nucleolar RNA U13 Neighboring gene RAD51 recombinase Neighboring gene regulator of microtubule dynamics 3

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in attachment of spindle microtubules to kinetochore IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in cell division IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in protein localization to kinetochore IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    kinetochore scaffold 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041760.1 Reference Mmul_10 Primary Assembly

      Range
      17030188..17104132
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028850749.1 → XP_028706582.1  kinetochore scaffold 1 isoform X1

      UniProtKB/TrEMBL
      A0A1D5QV87
      Related
      ENSMMUP00000051967.2, ENSMMUT00000053877.2
      Conserved Domains (2) summary
      COG1196
      Location:1916 → 2104
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      pfam04111
      Location:2003 → 2096
      APG6; Autophagy protein Apg6

    2. XM_028850748.1 → XP_028706581.1  kinetochore scaffold 1 isoform X1

      UniProtKB/TrEMBL
      A0A1D5QV87
      Conserved Domains (2) summary
      COG1196
      Location:1916 → 2104
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      pfam04111
      Location:2003 → 2096
      APG6; Autophagy protein Apg6

    3. XM_028850750.1 → XP_028706583.1  kinetochore scaffold 1 isoform X2

      Conserved Domains (2) summary
      COG1196
      Location:1768 → 1956
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      pfam04111
      Location:1855 → 1948
      APG6; Autophagy protein Apg6
    Nucleotide Protein
    Heading Accession and Version

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