U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    ARVCF ARVCF delta catenin family member [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 712399, updated on 17-Aug-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    ARVCFprovided by VGNC
    Official Full Name
    ARVCF delta catenin family memberprovided by VGNC
    Primary source
    VGNC:VGNC:70027
    See related
    Ensembl:ENSMMUG00000017153
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See ARVCF in Genome Data Viewer
    Location:
    chromosome: 10
    Exon count:
    20
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 10 NC_041763.1 (32618496..32673815)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 10 NC_027902.1 (61699472..61755068, complement)

    Chromosome 10 - NC_041763.1Genomic Context describing neighboring genes Neighboring gene tRNA methyltransferase 2 homolog A Neighboring gene DGCR8 microprocessor complex subunit Neighboring gene transport and golgi organization 2 homolog Neighboring gene microRNA mir-185 Neighboring gene catechol-O-methyltransferase Neighboring gene thioredoxin reductase 2 Neighboring gene G protein subunit beta 1 like Neighboring gene retrotransposon Gag like 10

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables cadherin binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cell-cell adhesion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in cell-cell junction assembly IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in adherens junction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    armadillo repeat protein deleted in velo-cardio-facial syndrome
    Names
    armadillo repeat gene deleted in velocardiofacial syndrome
    armadillo repeat gene deletes in velocardiofacial syndrome

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041763.1 Reference Mmul_10 Primary Assembly

      Range
      32618496..32673815
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015149728.2 → XP_015005214.2  armadillo repeat protein deleted in velo-cardio-facial syndrome isoform X1

      UniProtKB/TrEMBL
      G7N396, H9F4V8
      Related
      ENSMMUP00000022560.3, ENSMMUT00000024112.3
      Conserved Domains (2) summary
      smart00185
      Location:432 → 473
      ARM; Armadillo/beta-catenin-like repeats
      sd00043
      Location:360 → 385
      ARM; armadillo repeat [structural motif]

    2. XM_015149732.2 → XP_015005218.2  armadillo repeat protein deleted in velo-cardio-facial syndrome isoform X3

      UniProtKB/TrEMBL
      A0A5F8AD20
      Related
      ENSMMUP00000077371.1, ENSMMUT00000092851.1
      Conserved Domains (2) summary
      smart00185
      Location:432 → 473
      ARM; Armadillo/beta-catenin-like repeats
      sd00043
      Location:360 → 385
      ARM; armadillo repeat [structural motif]

    3. XM_015149730.2 → XP_015005216.2  armadillo repeat protein deleted in velo-cardio-facial syndrome isoform X2

      UniProtKB/TrEMBL
      H9F4V8
      Related
      ENSMMUP00000015273.4, ENSMMUT00000016302.4
      Conserved Domains (2) summary
      smart00185
      Location:432 → 473
      ARM; Armadillo/beta-catenin-like repeats
      sd00043
      Location:360 → 385
      ARM; armadillo repeat [structural motif]

    4. XM_015149733.2 → XP_015005219.2  armadillo repeat protein deleted in velo-cardio-facial syndrome isoform X4

      UniProtKB/TrEMBL
      A0A5F8AD20
      Conserved Domains (2) summary
      smart00185
      Location:432 → 473
      ARM; Armadillo/beta-catenin-like repeats
      sd00043
      Location:360 → 385
      ARM; armadillo repeat [structural motif]
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.