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    SEMA4F ssemaphorin 4F [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 710297, updated on 17-Aug-2024

    Summary

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    Official Symbol
    SEMA4Fprovided by VGNC
    Official Full Name
    ssemaphorin 4Fprovided by VGNC
    Primary source
    VGNC:VGNC:77167
    Locus tag
    EGK_05481
    See related
    Ensembl:ENSMMUG00000005149
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See SEMA4F in Genome Data Viewer
    Location:
    chromosome: 13
    Exon count:
    15
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 13 NC_041766.1 (34125589..34154015, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 13 NC_027905.1 (75681269..75709704)

    Chromosome 13 - NC_041766.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC114671931 Neighboring gene protein phosphatase 1 regulatory subunit 14B pseudogene Neighboring gene Golgi apparatus membrane protein TVP23 homolog B pseudogene Neighboring gene torsin-1B-like Neighboring gene meiosis 1 associated protein

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables chemorepellent activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables semaphorin receptor binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in axon guidance IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in negative chemotaxis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in negative regulation of axon extension involved in axon guidance IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in neural crest cell migration IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in positive regulation of cell migration IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in semaphorin-plexin signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in extracellular space IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    semaphorin-4F

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041766.1 Reference Mmul_10 Primary Assembly

      Range
      34125589..34154015 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015112715.2 → XP_014968201.1  semaphorin-4F isoform X3

      UniProtKB/TrEMBL
      A0A1D5QP56, H9F760
      Related
      ENSMMUP00000049833.2, ENSMMUT00000060669.2
      Conserved Domains (3) summary
      cd11261
      Location:52 → 478
      Sema_4F; The Sema domain, a protein interacting module, of semaphorin 4F (Sema4F)
      pfam01437
      Location:479 → 530
      PSI; Plexin repeat
      cl11960
      Location:537 → 616
      Ig; Immunoglobulin domain

    2. XM_015112714.2 → XP_014968200.1  semaphorin-4F isoform X2

      UniProtKB/TrEMBL
      H9F760
      Conserved Domains (3) summary
      cd11261
      Location:52 → 510
      Sema_4F; The Sema domain, a protein interacting module, of semaphorin 4F (Sema4F)
      pfam01437
      Location:511 → 562
      PSI; Plexin repeat
      cl11960
      Location:569 → 648
      Ig; Immunoglobulin domain

    3. XM_015112713.2 → XP_014968199.1  semaphorin-4F isoform X1

      UniProtKB/TrEMBL
      A0A5S6R6P5, A0A8J8YQR7, F7DBA4, G7NAF5, H9F760
      Related
      ENSMMUP00000006819.4, ENSMMUT00000007256.4
      Conserved Domains (3) summary
      cd11261
      Location:52 → 511
      Sema_4F; The Sema domain, a protein interacting module, of semaphorin 4F (Sema4F)
      pfam01437
      Location:512 → 563
      PSI; Plexin repeat
      cl11960
      Location:570 → 649
      Ig; Immunoglobulin domain

    4. XM_015112716.2 → XP_014968202.1  semaphorin-4F isoform X4

      Conserved Domains (2) summary
      cd11261
      Location:52 → 511
      Sema_4F; The Sema domain, a protein interacting module, of semaphorin 4F (Sema4F)
      smart00423
      Location:512 → 541
      PSI; domain found in Plexins, Semaphorins and Integrins
    Nucleotide Protein
    Heading Accession and Version

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