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    INO80 INO80 complex ATPase subunit [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 705111, updated on 17-Aug-2024

    Summary

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    Official Symbol
    INO80provided by VGNC
    Official Full Name
    INO80 complex ATPase subunitprovided by VGNC
    Primary source
    VGNC:VGNC:84358
    Locus tag
    EGK_17380
    See related
    Ensembl:ENSMMUG00000001737
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See INO80 in Genome Data Viewer
    Location:
    chromosome: 7
    Exon count:
    36
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 7 NC_041760.1 (17442265..17582630, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 7 NC_027899.1 (17363168..17503332, complement)

    Chromosome 7 - NC_041760.1Genomic Context describing neighboring genes Neighboring gene iron-sulfur cluster assembly 1 homolog, mitochondrial pseudogene Neighboring gene uncharacterized LOC114679381 Neighboring gene ChaC glutathione specific gamma-glutamylcyclotransferase 1 Neighboring gene exonuclease 3'-5' domain containing 1 Neighboring gene calcineurin like EF-hand protein 1 Neighboring gene 40S ribosomal protein S24

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ATP hydrolysis activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ATP-dependent chromatin remodeler activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables histone binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in DNA repair IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in chromatin remodeling IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of Ino80 complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    chromatin-remodeling ATPase INO80
    Names
    DNA helicase INO80
    INO80 complex subunit
    INO80 homolog
    Putative DNA helicase INO80 complex-like protein 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041760.1 Reference Mmul_10 Primary Assembly

      Range
      17442265..17582630 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015141961.2 → XP_014997447.1  chromatin-remodeling ATPase INO80 isoform X1

      UniProtKB/TrEMBL
      A0A5F7ZID3, A0A5F8A0E1, A0A8J8XAW7, F7GM13, G7MWQ0
      Related
      ENSMMUP00000070823.1, ENSMMUT00000095764.1
      Conserved Domains (3) summary
      COG0553
      Location:348 → 1259
      HepA; Superfamily II DNA or RNA helicase, SNF2 family [Transcription, Replication, recombination and repair]
      cd18002
      Location:518 → 746
      DEXQc_INO80; DEAQ-box helicase domain of INO80
      pfam13892
      Location:273 → 402
      DBINO; DNA-binding domain

    2. XM_028850755.1 → XP_028706588.1  chromatin-remodeling ATPase INO80 isoform X2

      UniProtKB/TrEMBL
      A0A5F7ZID3
      Related
      ENSMMUP00000064378.1, ENSMMUT00000107260.1
      Conserved Domains (4) summary
      COG0553
      Location:348 → 1259
      HepA; Superfamily II DNA or RNA helicase, SNF2 family [Transcription, Replication, recombination and repair]
      cd18002
      Location:518 → 746
      DEXQc_INO80; DEAQ-box helicase domain of INO80
      pfam11600
      Location:1272 → 1320
      CAF-1_p150; Chromatin assembly factor 1 complex p150 subunit, N-terminal
      pfam13892
      Location:273 → 402
      DBINO; DNA-binding domain
    Nucleotide Protein
    Heading Accession and Version

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