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    PLEKHJ1 pleckstrin homology domain containing J1 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 710129, updated on 17-Aug-2024

    Summary

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    Official Symbol
    PLEKHJ1provided by VGNC
    Official Full Name
    pleckstrin homology domain containing J1provided by VGNC
    Primary source
    VGNC:VGNC:76057
    See related
    Ensembl:ENSMMUG00000010109
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See PLEKHJ1 in Genome Data Viewer
    Location:
    chromosome: 19
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 19 NC_041772.1 (2075755..2082249, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 19 NC_027911.1 (2114438..2121033, complement)

    Chromosome 19 - NC_041772.1Genomic Context describing neighboring genes Neighboring gene IZUMO family member 4 Neighboring gene adaptor related protein complex 3 subunit delta 1 Neighboring gene DOT1 like histone lysine methyltransferase Neighboring gene microRNA mir-1227 Neighboring gene splicing factor 3a subunit 2 Neighboring gene anti-Mullerian hormone

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in endosome organization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in receptor recycling IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in retrograde transport, endosome to Golgi IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in early endosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in recycling endosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in trans-Golgi network IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    pleckstrin homology domain-containing family J member 1
    Names
    pleckstrin homology domain containing, family J member 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001266867.1 → NP_001253796.1  pleckstrin homology domain-containing family J member 1 isoform 2

      See identical proteins and their annotated locations for NP_001253796.1

      Status: PROVISIONAL

      Source sequence(s)
      JV047501
      UniProtKB/TrEMBL
      A0A1D5QGT4, H9FWH3
      Related
      ENSMMUP00000047254.2, ENSMMUT00000060950.2
      Conserved Domains (1) summary
      cd13258
      Location:1 → 112
      PH_PLEKHJ1; Pleckstrin homology domain containing, family J member 1 Pleckstrin homology (PH) domain

    2. NM_001376257.1 → NP_001363186.1  pleckstrin homology domain-containing family J member 1 isoform 1

      Status: VALIDATED

      Source sequence(s)
      QNVO02000224
      Conserved Domains (1) summary
      cd13258
      Location:1 → 112
      PH_PLEKHJ1; Pleckstrin homology domain containing, family J member 1 Pleckstrin homology (PH) domain

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041772.1 Reference Mmul_10 Primary Assembly

      Range
      2075755..2082249 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015122405.2 → XP_014977891.1  pleckstrin homology domain-containing family J member 1 isoform X1

      Conserved Domains (1) summary
      cd13258
      Location:1 → 112
      PH_PLEKHJ1; Pleckstrin homology domain containing, family J member 1 Pleckstrin homology (PH) domain

    2. XM_015122407.2 → XP_014977893.2  pleckstrin homology domain-containing family J member 1 isoform X2

      Conserved Domains (1) summary
      cl17171
      Location:1 → 57
      PH-like; Pleckstrin homology-like domain
    Nucleotide Protein
    Heading Accession and Version

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