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    VSIG1 V-set and immunoglobulin domain containing 1 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 703739, updated on 17-Aug-2024

    Summary

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    Official Symbol
    VSIG1provided by VGNC
    Official Full Name
    V-set and immunoglobulin domain containing 1provided by VGNC
    Primary source
    VGNC:VGNC:79734
    Locus tag
    EGK_20809
    See related
    Ensembl:ENSMMUG00000007189
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See VSIG1 in Genome Data Viewer
    Location:
    chromosome: X
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) X NC_041774.1 (104791353..104826188)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) X NC_027913.1 (102060101..102094832)

    Chromosome X - NC_041774.1Genomic Context describing neighboring genes Neighboring gene NACHT, LRR and PYD domains-containing protein 12-like Neighboring gene NACHT, LRR and PYD domains-containing protein 12-like Neighboring gene testis expressed 13B Neighboring gene proteasome 26S subunit, non-ATPase 10 Neighboring gene autophagy related 4A cysteine peptidase Neighboring gene collagen type IV alpha 6 chain

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653
    2. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in epithelial cell morphogenesis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in maintenance of gastrointestinal epithelium IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    V-set and immunoglobulin domain-containing protein 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041774.1 Reference Mmul_10 Primary Assembly

      Range
      104791353..104826188
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001092052.4 → XP_001092052.2  V-set and immunoglobulin domain-containing protein 1 isoform X3

      See identical proteins and their annotated locations for XP_001092052.2

      UniProtKB/TrEMBL
      A0A5F7ZHX9, A0A663DDA1, A0A8J8YEL7, F7EVD7, G7NSY4
      Related
      ENSMMUP00000009424.3, ENSMMUT00000010040.4
      Conserved Domains (3) summary
      pfam05887
      Location:321 → 409
      Trypan_PARP; Procyclic acidic repetitive protein (PARP)
      smart00410
      Location:190 → 263
      IG_like; Immunoglobulin like
      cl11960
      Location:28 → 163
      Ig; Immunoglobulin domain

    2. XM_015127970.2 → XP_014983456.1  V-set and immunoglobulin domain-containing protein 1 isoform X4

      UniProtKB/TrEMBL
      A0A5F7ZHX9
      Related
      ENSMMUP00000064235.1, ENSMMUT00000095879.1
      Conserved Domains (4) summary
      pfam05887
      Location:285 → 373
      Trypan_PARP; Procyclic acidic repetitive protein (PARP)
      cd00096
      Location:157 → 224
      Ig; Immunoglobulin domain
      smart00410
      Location:31 → 136
      IG_like; Immunoglobulin like
      cl11960
      Location:28 → 127
      Ig; Immunoglobulin domain

    3. XM_028842174.1 → XP_028698007.1  V-set and immunoglobulin domain-containing protein 1 isoform X2

      UniProtKB/TrEMBL
      A0A5F7ZHX9
      Conserved Domains (3) summary
      smart00410
      Location:113 → 186
      IG_like; Immunoglobulin like
      cl11960
      Location:28 → 96
      Ig; Immunoglobulin domain
      cl29137
      Location:244 → 332
      Trypan_PARP; Procyclic acidic repetitive protein (PARP)

    4. XM_028842173.1 → XP_028698006.1  V-set and immunoglobulin domain-containing protein 1 isoform X1

      UniProtKB/TrEMBL
      A0A5F7ZHX9
      Conserved Domains (2) summary
      smart00409
      Location:149 → 222
      IG; Immunoglobulin
      cl29137
      Location:280 → 368
      Trypan_PARP; Procyclic acidic repetitive protein (PARP)
    Nucleotide Protein
    Heading Accession and Version

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