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    PER2 period circadian regulator 2 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 696476, updated on 17-Aug-2024

    Summary

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    Official Symbol
    PER2provided by VGNC
    Official Full Name
    period circadian regulator 2provided by VGNC
    Primary source
    VGNC:VGNC:75943
    See related
    Ensembl:ENSMMUG00000018930
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See PER2 in Genome Data Viewer
    Location:
    chromosome: 12
    Exon count:
    25
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 12 NC_041765.1 (125647620..125693979, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 12 NC_027904.1 (120980828..121025947, complement)

    Chromosome 12 - NC_041765.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC706446 Neighboring gene TAR DNA-binding protein 43 pseudogene Neighboring gene hes family bHLH transcription factor 6 Neighboring gene uncharacterized LOC106992784 Neighboring gene uncharacterized LOC106992786 Neighboring gene TRAF3 interacting protein 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables transcription cis-regulatory region binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables transcription corepressor binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in circadian regulation of gene expression IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in entrainment of circadian clock by photoperiod IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in negative regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    period circadian protein homolog 2
    Names
    period circadian clock 2
    period homolog 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041765.1 Reference Mmul_10 Primary Assembly

      Range
      125647620..125693979 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015111477.2 → XP_014966963.2  period circadian protein homolog 2 isoform X2

      UniProtKB/TrEMBL
      F6YLH3, F6YLJ6, I0FW41
      Related
      ENSMMUP00000024910.4, ENSMMUT00000026617.4
      Conserved Domains (4) summary
      smart00091
      Location:184 → 239
      PAS; PAS domain
      PHA03247
      Location:804 → 1040
      PHA03247; large tegument protein UL36; Provisional
      pfam12114
      Location:1045 → 1227
      Period_C; Period protein 2/3C-terminal region
      pfam08447
      Location:346 → 430
      PAS_3; PAS fold

    2. XM_028831291.1 → XP_028687124.1  period circadian protein homolog 2 isoform X1

      UniProtKB/TrEMBL
      I0FW41
      Conserved Domains (4) summary
      smart00091
      Location:210 → 265
      PAS; PAS domain
      PHA03247
      Location:830 → 1066
      PHA03247; large tegument protein UL36; Provisional
      pfam12114
      Location:1071 → 1253
      Period_C; Period protein 2/3C-terminal region
      pfam08447
      Location:372 → 456
      PAS_3; PAS fold

    3. XM_015111476.2 → XP_014966962.2  period circadian protein homolog 2 isoform X2

      UniProtKB/TrEMBL
      F6YLH3, F6YLJ6, I0FW41
      Related
      ENSMMUP00000024911.4, ENSMMUT00000026618.4
      Conserved Domains (4) summary
      smart00091
      Location:184 → 239
      PAS; PAS domain
      PHA03247
      Location:804 → 1040
      PHA03247; large tegument protein UL36; Provisional
      pfam12114
      Location:1045 → 1227
      Period_C; Period protein 2/3C-terminal region
      pfam08447
      Location:346 → 430
      PAS_3; PAS fold
    Nucleotide Protein
    Heading Accession and Version

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