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    NAB1 NGFI-A binding protein 1 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 693274, updated on 17-Aug-2024

    Summary

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    Official Symbol
    NAB1provided by VGNC
    Official Full Name
    NGFI-A binding protein 1provided by VGNC
    Primary source
    VGNC:VGNC:99386
    See related
    Ensembl:ENSMMUG00000022664
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See NAB1 in Genome Data Viewer
    Location:
    chromosome: 12
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 12 NC_041765.1 (77851761..77898868)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 12 NC_027904.1 (78190496..78237793)

    Chromosome 12 - NC_041765.1Genomic Context describing neighboring genes Neighboring gene major facilitator superfamily domain containing 6 Neighboring gene nuclear envelope integral membrane protein 2 Neighboring gene U7 small nuclear RNA Neighboring gene uncharacterized LOC106992670 Neighboring gene heterogeneous nuclear ribonucleoprotein A3 pseudogene Neighboring gene glutaminase

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables transcription coregulator activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables transcription factor binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in negative regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    NGFI-A-binding protein 1
    Names
    NGFI-A binding protein 1 (EGR1 binding protein 1)

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001257641.1 → NP_001244570.1  NGFI-A-binding protein 1

      See identical proteins and their annotated locations for NP_001244570.1

      Status: PROVISIONAL

      Source sequence(s)
      JU334624
      UniProtKB/TrEMBL
      F7GU92, G7N8I7
      Related
      ENSMMUP00000029838.2, ENSMMUT00000031891.4
      Conserved Domains (3) summary
      pfam04905
      Location:190 → 317
      NCD2; NAB conserved region 2 (NCD2)
      pfam04902
      Location:322 → 486
      Nab1; Conserved region in Nab1
      pfam04904
      Location:6 → 83
      NCD1; NAB conserved region 1 (NCD1)

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041765.1 Reference Mmul_10 Primary Assembly

      Range
      77851761..77898868
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028830356.1 → XP_028686189.1  NGFI-A-binding protein 1 isoform X3

      UniProtKB/TrEMBL
      F7GU92, G7N8I7
      Conserved Domains (3) summary
      pfam04905
      Location:190 → 317
      NCD2; NAB conserved region 2 (NCD2)
      pfam04902
      Location:322 → 486
      Nab1; Conserved region in Nab1
      pfam04904
      Location:6 → 83
      NCD1; NAB conserved region 1 (NCD1)

    2. XM_028830355.1 → XP_028686188.1  NGFI-A-binding protein 1 isoform X3

      UniProtKB/TrEMBL
      F7GU92, G7N8I7
      Conserved Domains (3) summary
      pfam04905
      Location:190 → 317
      NCD2; NAB conserved region 2 (NCD2)
      pfam04902
      Location:322 → 486
      Nab1; Conserved region in Nab1
      pfam04904
      Location:6 → 83
      NCD1; NAB conserved region 1 (NCD1)

    3. XM_028830357.1 → XP_028686190.1  NGFI-A-binding protein 1 isoform X3

      UniProtKB/TrEMBL
      F7GU92, G7N8I7
      Conserved Domains (3) summary
      pfam04905
      Location:190 → 317
      NCD2; NAB conserved region 2 (NCD2)
      pfam04902
      Location:322 → 486
      Nab1; Conserved region in Nab1
      pfam04904
      Location:6 → 83
      NCD1; NAB conserved region 1 (NCD1)

    4. XM_015110568.2 → XP_014966054.1  NGFI-A-binding protein 1 isoform X3

      UniProtKB/TrEMBL
      F7GU92, G7N8I7
      Conserved Domains (3) summary
      pfam04905
      Location:190 → 317
      NCD2; NAB conserved region 2 (NCD2)
      pfam04902
      Location:322 → 486
      Nab1; Conserved region in Nab1
      pfam04904
      Location:6 → 83
      NCD1; NAB conserved region 1 (NCD1)

    5. XM_028830358.1 → XP_028686191.1  NGFI-A-binding protein 1 isoform X3

      UniProtKB/TrEMBL
      F7GU92, G7N8I7
      Conserved Domains (3) summary
      pfam04905
      Location:190 → 317
      NCD2; NAB conserved region 2 (NCD2)
      pfam04902
      Location:322 → 486
      Nab1; Conserved region in Nab1
      pfam04904
      Location:6 → 83
      NCD1; NAB conserved region 1 (NCD1)

    6. XM_015110567.2 → XP_014966053.1  NGFI-A-binding protein 1 isoform X3

      UniProtKB/TrEMBL
      F7GU92, G7N8I7
      Conserved Domains (3) summary
      pfam04905
      Location:190 → 317
      NCD2; NAB conserved region 2 (NCD2)
      pfam04902
      Location:322 → 486
      Nab1; Conserved region in Nab1
      pfam04904
      Location:6 → 83
      NCD1; NAB conserved region 1 (NCD1)

    7. XM_028830359.1 → XP_028686192.1  NGFI-A-binding protein 1 isoform X3

      UniProtKB/TrEMBL
      F7GU92, G7N8I7
      Conserved Domains (3) summary
      pfam04905
      Location:190 → 317
      NCD2; NAB conserved region 2 (NCD2)
      pfam04902
      Location:322 → 486
      Nab1; Conserved region in Nab1
      pfam04904
      Location:6 → 83
      NCD1; NAB conserved region 1 (NCD1)

    8. XM_015110571.2 → XP_014966057.1  NGFI-A-binding protein 1 isoform X3

      UniProtKB/TrEMBL
      F7GU92, G7N8I7
      Related
      ENSMMUP00000070406.1, ENSMMUT00000079499.1
      Conserved Domains (3) summary
      pfam04905
      Location:190 → 317
      NCD2; NAB conserved region 2 (NCD2)
      pfam04902
      Location:322 → 486
      Nab1; Conserved region in Nab1
      pfam04904
      Location:6 → 83
      NCD1; NAB conserved region 1 (NCD1)

    9. XM_028830354.1 → XP_028686187.1  NGFI-A-binding protein 1 isoform X1

      UniProtKB/TrEMBL
      G7N8I7
      Conserved Domains (3) summary
      pfam04904
      Location:28 → 105
      NCD1; NAB conserved region 1 (NCD1)
      pfam04902
      Location:346 → 508
      Nab1; Conserved region in Nab1
      pfam04905
      Location:212 → 339
      NCD2; NAB conserved region 2 (NCD2)

    10. XM_015110564.2 → XP_014966050.1  NGFI-A-binding protein 1 isoform X1

      UniProtKB/TrEMBL
      G7N8I7
      Related
      ENSMMUP00000037988.3, ENSMMUT00000044974.3
      Conserved Domains (3) summary
      pfam04904
      Location:28 → 105
      NCD1; NAB conserved region 1 (NCD1)
      pfam04902
      Location:346 → 508
      Nab1; Conserved region in Nab1
      pfam04905
      Location:212 → 339
      NCD2; NAB conserved region 2 (NCD2)

    11. XM_015110566.2 → XP_014966052.1  NGFI-A-binding protein 1 isoform X2

      UniProtKB/TrEMBL
      G7N8I7
      Conserved Domains (3) summary
      pfam04902
      Location:346 → 507
      Nab1; Conserved region in Nab1
      pfam04904
      Location:28 → 105
      NCD1; NAB conserved region 1 (NCD1)
      pfam04905
      Location:196 → 340
      NCD2; NAB conserved region 2 (NCD2)
    Nucleotide Protein
    Heading Accession and Version

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