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    LRRFIP1 LRR binding FLII interacting protein 1 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 704379, updated on 17-Aug-2024

    Summary

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    Official Symbol
    LRRFIP1provided by VGNC
    Official Full Name
    LRR binding FLII interacting protein 1provided by VGNC
    Primary source
    VGNC:VGNC:99376
    See related
    Ensembl:ENSMMUG00000003386
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See LRRFIP1 in Genome Data Viewer
    Location:
    chromosome: 12
    Exon count:
    29
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 12 NC_041765.1 (125020925..125190411)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 12 NC_027904.1 (120346280..120514088)

    Chromosome 12 - NC_041765.1Genomic Context describing neighboring genes Neighboring gene prolactin releasing hormone Neighboring gene RAB17, member RAS oncogene family Neighboring gene uncharacterized LOC114671454 Neighboring gene uncharacterized LOC114671455 Neighboring gene RNA binding motif protein 44 Neighboring gene small nucleolar RNA SNORD55/SNORD39 Neighboring gene receptor activity modifying protein 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    leucine-rich repeat flightless-interacting protein 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041765.1 Reference Mmul_10 Primary Assembly

      Range
      125020925..125190411
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015111449.2 → XP_014966935.2  leucine-rich repeat flightless-interacting protein 1 isoform X18

      UniProtKB/TrEMBL
      A0A1D5R9C5
      Related
      ENSMMUP00000056916.2, ENSMMUT00000078606.2
      Conserved Domains (2) summary
      TIGR03007
      Location:409 → 672
      pepcterm_ChnLen; polysaccharide chain length determinant protein, PEP-CTERM locus subfamily
      pfam09738
      Location:254 → 597
      LRRFIP; LRRFIP family

    2. XM_028831276.1 → XP_028687109.1  leucine-rich repeat flightless-interacting protein 1 isoform X22

      UniProtKB/TrEMBL
      F7FEY5
      Conserved Domains (3) summary
      PRK05431
      Location:287 → 366
      PRK05431; seryl-tRNA synthetase; Provisional
      pfam09738
      Location:172 → 491
      LRRFIP; LRRFIP family
      pfam11932
      Location:507 → 566
      DUF3450; Protein of unknown function (DUF3450)

    3. XM_015111420.2 → XP_014966906.2  leucine-rich repeat flightless-interacting protein 1 isoform X1

      Conserved Domains (2) summary
      pfam02463
      Location:304 → 877
      SMC_N; RecF/RecN/SMC N terminal domain
      pfam09738
      Location:269 → 504
      LRRFIP; LRRFIP family

    4. XM_015111422.2 → XP_014966908.2  leucine-rich repeat flightless-interacting protein 1 isoform X3

      Conserved Domains (2) summary
      pfam02463
      Location:291 → 864
      SMC_N; RecF/RecN/SMC N terminal domain
      pfam09738
      Location:256 → 491
      LRRFIP; LRRFIP family

    5. XM_015111438.2 → XP_014966924.2  leucine-rich repeat flightless-interacting protein 1 isoform X5

      Conserved Domains (1) summary
      pfam09738
      Location:172 → 383
      LRRFIP; LRRFIP family

    6. XM_015111437.2 → XP_014966923.2  leucine-rich repeat flightless-interacting protein 1 isoform X4

      UniProtKB/TrEMBL
      G7N997
      Conserved Domains (1) summary
      pfam09738
      Location:152 → 387
      LRRFIP; LRRFIP family

    7. XM_028831268.1 → XP_028687101.1  leucine-rich repeat flightless-interacting protein 1 isoform X6

      UniProtKB/TrEMBL
      G7N997
      Conserved Domains (2) summary
      pfam02463
      Location:133 → 706
      SMC_N; RecF/RecN/SMC N terminal domain
      pfam09738
      Location:52 → 333
      LRRFIP; LRRFIP family

    8. XM_028831270.1 → XP_028687103.1  leucine-rich repeat flightless-interacting protein 1 isoform X8

      UniProtKB/TrEMBL
      G7N997
      Conserved Domains (1) summary
      pfam09738
      Location:52 → 309
      LRRFIP; LRRFIP family

    9. XM_028831271.1 → XP_028687104.1  leucine-rich repeat flightless-interacting protein 1 isoform X12

      UniProtKB/TrEMBL
      G7N997
      Conserved Domains (1) summary
      pfam09738
      Location:52 → 308
      LRRFIP; LRRFIP family

    10. XM_015111440.2 → XP_014966926.2  leucine-rich repeat flightless-interacting protein 1 isoform X9

      UniProtKB/TrEMBL
      A0A5F8A2T8
      Conserved Domains (2) summary
      pfam02463
      Location:107 → 680
      SMC_N; RecF/RecN/SMC N terminal domain
      pfam09738
      Location:52 → 307
      LRRFIP; LRRFIP family

    11. XM_015111444.2 → XP_014966930.2  leucine-rich repeat flightless-interacting protein 1 isoform X11

      UniProtKB/TrEMBL
      H9ZFA9
      Conserved Domains (1) summary
      pfam09738
      Location:52 → 283
      LRRFIP; LRRFIP family

    12. XM_015111447.2 → XP_014966933.2  leucine-rich repeat flightless-interacting protein 1 isoform X14

      UniProtKB/TrEMBL
      H9ZFA9
      Conserved Domains (1) summary
      pfam09738
      Location:52 → 251
      LRRFIP; LRRFIP family

    13. XM_028831277.1 → XP_028687110.1  leucine-rich repeat flightless-interacting protein 1 isoform X23

      UniProtKB/TrEMBL
      F7FEY5
      Conserved Domains (3) summary
      PRK05431
      Location:267 → 346
      PRK05431; seryl-tRNA synthetase; Provisional
      pfam09738
      Location:152 → 471
      LRRFIP; LRRFIP family
      pfam11932
      Location:487 → 546
      DUF3450; Protein of unknown function (DUF3450)

    14. XM_015111450.2 → XP_014966936.1  leucine-rich repeat flightless-interacting protein 1 isoform X20

      UniProtKB/TrEMBL
      A0A1D5QZD0
      Related
      ENSMMUP00000053412.1, ENSMMUT00000057482.2
      Conserved Domains (2) summary
      COG1340
      Location:362 → 632
      COG1340; Uncharacterized coiled-coil protein, contains DUF342 domain [Function unknown]
      cl19219
      Location:360 → 454
      DUF342; Protein of unknown function (DUF342)

    15. XM_002799099.3 → XP_002799145.2  leucine-rich repeat flightless-interacting protein 1 isoform X15

      UniProtKB/TrEMBL
      F6S3D2, H9ZFA9
      Related
      ENSMMUP00000037343.2, ENSMMUT00000044328.3
      Conserved Domains (1) summary
      pfam09738
      Location:42 → 241
      LRRFIP; LRRFIP family

    16. XM_015111421.2 → XP_014966907.2  leucine-rich repeat flightless-interacting protein 1 isoform X2

      Conserved Domains (2) summary
      pfam02463
      Location:294 → 867
      SMC_N; RecF/RecN/SMC N terminal domain
      pfam09738
      Location:259 → 494
      LRRFIP; LRRFIP family

    17. XM_001092734.4 → XP_001092734.3  leucine-rich repeat flightless-interacting protein 1 isoform X25

      UniProtKB/TrEMBL
      A0A5F8A9S6, G7N997
      Related
      ENSMMUP00000074693.1, ENSMMUT00000083805.1
      Conserved Domains (1) summary
      pfam09738
      Location:42 → 297
      LRRFIP; LRRFIP family

    18. XM_002799097.3 → XP_002799143.2  leucine-rich repeat flightless-interacting protein 1 isoform X26

      UniProtKB/TrEMBL
      H9ZFA9
      Conserved Domains (1) summary
      pfam09738
      Location:42 → 273
      LRRFIP; LRRFIP family

    19. XM_028831269.1 → XP_028687102.1  leucine-rich repeat flightless-interacting protein 1 isoform X7

      UniProtKB/TrEMBL
      A0A5F8A2T8
      Conserved Domains (2) summary
      pfam02463
      Location:123 → 696
      SMC_N; RecF/RecN/SMC N terminal domain
      pfam09738
      Location:42 → 323
      LRRFIP; LRRFIP family

    20. XM_015111442.2 → XP_014966928.2  leucine-rich repeat flightless-interacting protein 1 isoform X10

      UniProtKB/TrEMBL
      A0A5F8A2T8
      Conserved Domains (2) summary
      pfam02463
      Location:97 → 670
      SMC_N; RecF/RecN/SMC N terminal domain
      pfam09738
      Location:42 → 297
      LRRFIP; LRRFIP family

    21. XM_015111446.2 → XP_014966932.2  leucine-rich repeat flightless-interacting protein 1 isoform X13

      UniProtKB/TrEMBL
      H9ZFA9
      Conserved Domains (1) summary
      pfam09738
      Location:42 → 273
      LRRFIP; LRRFIP family

    22. XM_015111454.2 → XP_014966940.1  leucine-rich repeat flightless-interacting protein 1 isoform X24

      UniProtKB/TrEMBL
      H9ZFA8
      Conserved Domains (1) summary
      pfam09738
      Location:42 → 318
      DUF2051; Double stranded RNA binding protein (DUF2051)

    23. XM_028831274.1 → XP_028687107.1  leucine-rich repeat flightless-interacting protein 1 isoform X19

      UniProtKB/TrEMBL
      F7FEZ5
      Conserved Domains (2) summary
      pfam08614
      Location:512 → 599
      ATG16; Autophagy protein 16 (ATG16)
      pfam09738
      Location:252 → 533
      LRRFIP; LRRFIP family

    24. XM_028831272.1 → XP_028687105.1  leucine-rich repeat flightless-interacting protein 1 isoform X16

      UniProtKB/TrEMBL
      F7FEW0
      Conserved Domains (2) summary
      TIGR03007
      Location:407 → 670
      pepcterm_ChnLen; polysaccharide chain length determinant protein, PEP-CTERM locus subfamily
      pfam09738
      Location:252 → 595
      LRRFIP; LRRFIP family

    25. XM_028831275.1 → XP_028687108.1  leucine-rich repeat flightless-interacting protein 1 isoform X21

      Conserved Domains (2) summary
      pfam08614
      Location:488 → 575
      ATG16; Autophagy protein 16 (ATG16)
      pfam09738
      Location:252 → 509
      LRRFIP; LRRFIP family

    26. XM_028831273.1 → XP_028687106.1  leucine-rich repeat flightless-interacting protein 1 isoform X17

      UniProtKB/TrEMBL
      A0A1D5R9C5
      Conserved Domains (2) summary
      TIGR03007
      Location:392 → 655
      pepcterm_ChnLen; polysaccharide chain length determinant protein, PEP-CTERM locus subfamily
      pfam09738
      Location:237 → 580
      LRRFIP; LRRFIP family
    Nucleotide Protein
    Heading Accession and Version

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