U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    IFT52 intraflagellar transport 52 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 694933, updated on 17-Aug-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    IFT52provided by VGNC
    Official Full Name
    intraflagellar transport 52provided by VGNC
    Primary source
    VGNC:VGNC:84916
    Locus tag
    EGK_02396
    See related
    Ensembl:ENSMMUG00000000396
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See IFT52 in Genome Data Viewer
    Location:
    chromosome: 10
    Exon count:
    17
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 10 NC_041763.1 (78821509..78876634)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 10 NC_027902.1 (20863712..20918028, complement)

    Chromosome 10 - NC_041763.1Genomic Context describing neighboring genes Neighboring gene L3MBTL histone methyl-lysine binding protein 1 Neighboring gene transmembrane protein 14C pseudogene Neighboring gene serum/glucocorticoid regulated kinase 2 Neighboring gene 60S ribosomal protein L27a pseudogene Neighboring gene MYB proto-oncogene like 2

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in cilium assembly IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in intraciliary transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in centriole IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in cilium IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of intraciliary transport particle B IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    intraflagellar transport protein 52 homolog
    Names
    Protein NGD5-like protein
    intraflagellar transport 52 homolog

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001261644.1 → NP_001248573.1  intraflagellar transport protein 52 homolog

      See identical proteins and their annotated locations for NP_001248573.1

      Status: PROVISIONAL

      Source sequence(s)
      JV045585
      UniProtKB/TrEMBL
      A0A8J8Y4U0, F6X5E4, F7AQX1, G7N4T3, H9YUQ9
      Related
      ENSMMUP00000000531.3, ENSMMUT00000000578.3
      Conserved Domains (1) summary
      cl23805
      Location:15 → 116
      ABC_transp_aux; ABC-type uncharacterized transport system

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041763.1 Reference Mmul_10 Primary Assembly

      Range
      78821509..78876634
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028827171.1 → XP_028683004.1  intraflagellar transport protein 52 homolog isoform X4

    2. XM_028827169.1 → XP_028683002.1  intraflagellar transport protein 52 homolog isoform X2

      UniProtKB/TrEMBL
      A0A5F7ZBB4, F7AQX1
      Related
      ENSMMUP00000062479.1, ENSMMUT00000100395.1
      Conserved Domains (1) summary
      cl23805
      Location:15 → 116
      ABC_transp_aux; ABC-type uncharacterized transport system

    3. XM_015148814.2 → XP_015004300.1  intraflagellar transport protein 52 homolog isoform X1

      UniProtKB/TrEMBL
      A0A8J8Y4U0, F6X5E4, F7AQX1, G7N4T3, H9YUQ9
      Related
      ENSMMUP00000062960.1, ENSMMUT00000081059.1
      Conserved Domains (1) summary
      cl23805
      Location:15 → 116
      ABC_transp_aux; ABC-type uncharacterized transport system

    4. XM_028827170.1 → XP_028683003.1  intraflagellar transport protein 52 homolog isoform X3

    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.