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    INTS6L integrator complex subunit 6 like [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 709688, updated on 17-Aug-2024

    Summary

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    Official Symbol
    INTS6Lprovided by VGNC
    Official Full Name
    integrator complex subunit 6 likeprovided by VGNC
    Primary source
    VGNC:VGNC:73666
    Locus tag
    EGK_20969
    See related
    Ensembl:ENSMMUG00000017881
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See INTS6L in Genome Data Viewer
    Location:
    chromosome: X
    Exon count:
    20
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) X NC_041774.1 (131797873..131860515)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) X NC_027913.1 (129512665..129575265)

    Chromosome X - NC_041774.1Genomic Context describing neighboring genes Neighboring gene rootletin pseudogene Neighboring gene tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit WDR4 pseudogene Neighboring gene protein C-ets-2 pseudogene Neighboring gene sarcoma antigen 1-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653
    2. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in snRNA 3'-end processing IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of integrator complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    integrator complex subunit 6-like
    Names
    Protein DDX26B

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001265682.1 → NP_001252611.1  integrator complex subunit 6-like

      See identical proteins and their annotated locations for NP_001252611.1

      Status: PROVISIONAL

      Source sequence(s)
      JV635556
      UniProtKB/TrEMBL
      A0A1D5RBU0, A0A8J8XC01, F7F5Q2, G7NRN6
      Related
      ENSMMUP00000057781.1, ENSMMUT00000071547.2
      Conserved Domains (2) summary
      pfam13519
      Location:4 → 132
      VWA_2; von Willebrand factor type A domain
      pfam15300
      Location:777 → 838
      INT_SG_DDX_CT_C; INTS6/SAGE1/DDX26B/CT45 C-terminus

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041774.1 Reference Mmul_10 Primary Assembly

      Range
      131797873..131860515
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028841802.1 → XP_028697635.1  integrator complex subunit 6-like isoform X5

      Conserved Domains (1) summary
      pfam13519
      Location:4 → 103
      VWA_2; von Willebrand factor type A domain

    2. XM_015128225.2 → XP_014983711.1  integrator complex subunit 6-like isoform X4

      Conserved Domains (1) summary
      cd00198
      Location:4 → 131
      vWFA; Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of ...

    3. XM_028841803.1 → XP_028697636.1  integrator complex subunit 6-like isoform X6

      UniProtKB/TrEMBL
      F7F5Q2
      Conserved Domains (2) summary
      pfam13519
      Location:4 → 103
      VWA_2; von Willebrand factor type A domain
      pfam15300
      Location:777 → 838
      INT_SG_DDX_CT_C; INTS6/SAGE1/DDX26B/CT45 C-terminus

    4. XM_028841804.1 → XP_028697637.1  integrator complex subunit 6-like isoform X7

      UniProtKB/TrEMBL
      F7F5Q2
      Conserved Domains (2) summary
      pfam13519
      Location:4 → 103
      VWA_2; von Willebrand factor type A domain
      pfam15300
      Location:733 → 794
      INT_SG_DDX_CT_C; INTS6/SAGE1/DDX26B/CT45 C-terminus

    5. XM_015128223.2 → XP_014983709.1  integrator complex subunit 6-like isoform X1

      UniProtKB/TrEMBL
      F7F5P7
      Related
      ENSMMUP00000023506.3, ENSMMUT00000025127.3
      Conserved Domains (2) summary
      pfam13519
      Location:4 → 132
      VWA_2; von Willebrand factor type A domain
      pfam15300
      Location:814 → 875
      INT_SG_DDX_CT_C; INTS6/SAGE1/DDX26B/CT45 C-terminus

    6. XM_028841801.1 → XP_028697634.1  integrator complex subunit 6-like isoform X3

      UniProtKB/TrEMBL
      F7F5Q2
      Conserved Domains (2) summary
      pfam13519
      Location:4 → 103
      VWA_2; von Willebrand factor type A domain
      pfam15300
      Location:733 → 794
      INT_SG_DDX_CT_C; INTS6/SAGE1/DDX26B/CT45 C-terminus

    7. XM_015128224.2 → XP_014983710.1  integrator complex subunit 6-like isoform X2

      UniProtKB/TrEMBL
      A0A5F7ZUI4, F7F5P7
      Related
      ENSMMUP00000068823.1, ENSMMUT00000086669.1
      Conserved Domains (2) summary
      cd00198
      Location:4 → 131
      vWFA; Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of ...
      pfam15300
      Location:770 → 831
      INT_SG_DDX_CT_C; INTS6/SAGE1/DDX26B/CT45 C-terminus

    RNA

    1. XR_003725747.1 RNA Sequence

    2. XR_003725748.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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