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    PYM1 PYM homolog 1, exon junction complex associated factor [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 708148, updated on 17-Aug-2024

    Summary

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    Official Symbol
    PYM1provided by VGNC
    Official Full Name
    PYM homolog 1, exon junction complex associated factorprovided by VGNC
    Primary source
    VGNC:VGNC:76570
    See related
    Ensembl:ENSMMUG00000011002
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Also known as
    WIBG
    Orthologs
    human mouse all
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    Genomic context

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    See PYM1 in Genome Data Viewer
    Location:
    chromosome: 11
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 11 NC_041764.1 (55455829..55483181, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 11 NC_027903.1 (54629743..54655214, complement)

    Chromosome 11 - NC_041764.1Genomic Context describing neighboring genes Neighboring gene U1 spliceosomal RNA Neighboring gene glutathione S-transferase P pseudogene Neighboring gene diacylglycerol kinase alpha Neighboring gene premelanosome protein

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables RNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in exon-exon junction complex disassembly IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of exon-exon junction complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    partner of Y14 and mago
    Names
    within bgcn homolog

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001257874.1 → NP_001244803.1  partner of Y14 and mago

      See identical proteins and their annotated locations for NP_001244803.1

      Status: PROVISIONAL

      Source sequence(s)
      JU336707
      UniProtKB/TrEMBL
      A0A1D5Q539, A0A5F8A2E3, F7GQZ0
      Related
      ENSMMUP00000014411.4, ENSMMUT00000015381.4
      Conserved Domains (1) summary
      pfam09282
      Location:11 → 37
      Mago-bind; Mago binding

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041764.1 Reference Mmul_10 Primary Assembly

      Range
      55455829..55483181 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028828913.1 → XP_028684746.1  partner of Y14 and mago isoform X2

      UniProtKB/TrEMBL
      A0A5F8A2E3, A0A8J8YKJ6, G7N7A4, I0FVN5
      Conserved Domains (1) summary
      pfam09282
      Location:14 → 38
      Mago-bind; Mago binding

    2. XM_028828912.1 → XP_028684745.1  partner of Y14 and mago isoform X1

      UniProtKB/TrEMBL
      A0A5F8A2E3
      Conserved Domains (1) summary
      pfam09282
      Location:46 → 72
      Mago-bind; Mago binding
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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