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    CLTA clathrin light chain A [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 693659, updated on 17-Aug-2024

    Summary

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    Official Symbol
    CLTAprovided by VGNC
    Official Full Name
    clathrin light chain Aprovided by VGNC
    Primary source
    VGNC:VGNC:71266
    See related
    Ensembl:ENSMMUG00000006132
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See CLTA in Genome Data Viewer
    Location:
    chromosome: 15
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 15 NC_041768.1 (47937673..47959413, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 15 NC_027907.1 (47957484..47979212, complement)

    Chromosome 15 - NC_041768.1Genomic Context describing neighboring genes Neighboring gene high mobility group protein B3-like Neighboring gene U4 spliceosomal RNA Neighboring gene glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase Neighboring gene calicin Neighboring gene GLI pathogenesis related 2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables clathrin heavy chain binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables structural molecule activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in clathrin coat assembly IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in clathrin-dependent endocytosis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in intracellular protein transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of clathrin coat of coated pit IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of clathrin coat of trans-Golgi network vesicle IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in postsynaptic endocytic zone cytoplasmic component IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in synaptic vesicle membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    clathrin light chain A
    Names
    clathrin, light chain (Lca)

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041768.1 Reference Mmul_10 Primary Assembly

      Range
      47937673..47959413 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015117455.1 → XP_014972941.1  clathrin light chain A isoform X5

      UniProtKB/TrEMBL
      H9EPP9, H9F105
      Conserved Domains (1) summary
      pfam01086
      Location:22 → 161
      Clathrin_lg_ch; Clathrin light chain

    2. XM_015117454.1 → XP_014972940.1  clathrin light chain A isoform X4

      UniProtKB/TrEMBL
      A0A1D5QAA8, F6PS94, H9FPR3
      Related
      ENSMMUP00000044976.2, ENSMMUT00000058598.2
      Conserved Domains (1) summary
      pfam01086
      Location:20 → 213
      Clathrin_lg_ch; Clathrin light chain

    3. XM_015117452.1 → XP_014972938.1  clathrin light chain A isoform X3

      UniProtKB/TrEMBL
      G7NFA9, H9YUB6
      Related
      ENSMMUP00000068012.1, ENSMMUT00000103925.1
      Conserved Domains (1) summary
      pfam01086
      Location:20 → 225
      Clathrin_lg_ch; Clathrin light chain

    4. XM_015117451.1 → XP_014972937.1  clathrin light chain A isoform X2

      UniProtKB/TrEMBL
      F6PS94, F7AZ71, H9FPR4
      Related
      ENSMMUP00000008058.4, ENSMMUT00000008572.4
      Conserved Domains (1) summary
      pfam01086
      Location:20 → 231
      Clathrin_lg_ch; Clathrin light chain

    5. XM_015117450.1 → XP_014972936.1  clathrin light chain A isoform X1

      UniProtKB/TrEMBL
      A0A1D5RAM5, G7NFA9
      Related
      ENSMMUP00000057366.2, ENSMMUT00000064168.2
      Conserved Domains (1) summary
      pfam01086
      Location:20 → 243
      Clathrin_lg_ch; Clathrin light chain
    Nucleotide Protein
    Heading Accession and Version

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