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    EGLN1 egl-9 family hypoxia inducible factor 1 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 713410, updated on 17-Aug-2024

    Summary

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    Official Symbol
    EGLN1provided by VGNC
    Official Full Name
    egl-9 family hypoxia inducible factor 1provided by VGNC
    Primary source
    VGNC:VGNC:72036
    See related
    Ensembl:ENSMMUG00000053396
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See EGLN1 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 1 NC_041754.1 (17562575..17623190)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 1 NC_027893.1 (207588272..207648882, complement)

    Chromosome 1 - NC_041754.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC114678895 Neighboring gene translin associated factor X Neighboring gene uncharacterized LOC114678894 Neighboring gene SprT-like N-terminal domain Neighboring gene exocyst complex component 8

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables L-ascorbic acid binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ferrous iron binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables peptidyl-proline 4-dioxygenase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cellular response to hypoxia IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in peptidyl-proline hydroxylation to 4-hydroxy-L-proline IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    egl nine homolog 1
    XP_001104870.1
    XP_014981688.1
    XP_028705538.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041754.1 Reference Mmul_10 Primary Assembly

      Range
      17562575..17623190
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001104870.4 → XP_001104870.1  egl nine homolog 1 isoform X1

      UniProtKB/TrEMBL
      A0A5F8AKN1
      Related
      ENSMMUP00000078396.1, ENSMMUT00000098156.1
      Conserved Domains (2) summary
      smart00702
      Location:220 → 391
      P4Hc; Prolyl 4-hydroxylase alpha subunit homologues
      pfam01753
      Location:21 → 58
      zf-MYND; MYND finger

    2. XM_015126202.2 → XP_014981688.1  egl nine homolog 1 isoform X2

      Conserved Domains (2) summary
      smart00702
      Location:220 → 380
      P4Hc; Prolyl 4-hydroxylase alpha subunit homologues
      pfam01753
      Location:21 → 58
      zf-MYND; MYND finger

    3. XM_028849705.1 → XP_028705538.1  egl nine homolog 1 isoform X3

      Conserved Domains (2) summary
      pfam01753
      Location:21 → 58
      zf-MYND; MYND finger
      cl21496
      Location:220 → 333
      2OG-FeII_Oxy; 2OG-Fe(II) oxygenase superfamily
    Nucleotide Protein
    Heading Accession and Version

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