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    ATL1 atlastin GTPase 1 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 706313, updated on 17-Aug-2024

    Summary

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    Official Symbol
    ATL1provided by VGNC
    Official Full Name
    atlastin GTPase 1provided by VGNC
    Primary source
    VGNC:VGNC:70049
    See related
    Ensembl:ENSMMUG00000009577
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See ATL1 in Genome Data Viewer
    Location:
    chromosome: 7
    Exon count:
    15
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 7 NC_041760.1 (112737640..112839094)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 7 NC_027899.1 (112540612..112642664)

    Chromosome 7 - NC_041760.1Genomic Context describing neighboring genes Neighboring gene distal membrane arm assembly component 2 like Neighboring gene cyclin dependent kinase like 1 Neighboring gene uncharacterized LOC106999425 Neighboring gene mitogen-activated protein kinase kinase kinase kinase 5 Neighboring gene small nuclear ribonucleoprotein G pseudogene Neighboring gene salvador family WW domain containing protein 1 Neighboring gene ninein

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables GTP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables GTPase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in endoplasmic reticulum organization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in protein homooligomerization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    atlastin-1
    NP_001244422.1
    XP_014999122.1
    XP_014999123.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001257493.1 → NP_001244422.1  atlastin-1

      See identical proteins and their annotated locations for NP_001244422.1

      Status: PROVISIONAL

      Source sequence(s)
      JU334767
      UniProtKB/TrEMBL
      F6X4P5, H9FV60, H9FV61
      Related
      ENSMMUP00000079372.1, ENSMMUT00000091538.1
      Conserved Domains (1) summary
      pfam02263
      Location:43 → 314
      GBP; Guanylate-binding protein, N-terminal domain

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041760.1 Reference Mmul_10 Primary Assembly

      Range
      112737640..112839094
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015143637.2 → XP_014999123.1  atlastin-1 isoform X1

      UniProtKB/TrEMBL
      A0A1D5Q7Z0, A0A5K1TYG0, F6X4P5, H9FV60
      Related
      ENSMMUP00000044157.2, ENSMMUT00000070859.2
      Conserved Domains (1) summary
      pfam02263
      Location:43 → 314
      GBP; Guanylate-binding protein, N-terminal domain

    2. XM_015143636.2 → XP_014999122.1  atlastin-1 isoform X1

      UniProtKB/TrEMBL
      A0A1D5Q7Z0, A0A5K1TYG0, F6X4P5, H9FV60
      Related
      ENSMMUP00000067655.1, ENSMMUT00000096072.1
      Conserved Domains (1) summary
      pfam02263
      Location:43 → 314
      GBP; Guanylate-binding protein, N-terminal domain
    Nucleotide Protein
    Heading Accession and Version

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